Table 1.
Kinetic constants of the reactions between mesotrypsin and different Kunitz type inhibitors
Inhibitor | Ki | Ki (fold decrease) | kon | koff | kcata | kcat (fold decrease) |
---|---|---|---|---|---|---|
m | m−1·s−1 | s−1 | s−1 | |||
APPIWT | (1.3 ± 0.2) × 10−7b,c | (2.4 ± 0.3) × 106i | (3.1 ± 0.02) × 10−1f | (35.6 ± 2.3) × 10−3c | ||
APPII18F | (3.3 ± 0.2) × 10−9b,c | (5.9 ± 0.4) × 106i | (19.5 ± 0.7) × 10−3f | (10.4 ± 0.9) × 10−3c | ||
APPIM17G/I18F/F34V | (9.8 ± 0.1) × 10−11f,g | 34h | (5.0 ± 0.1) × 106g,i | (5.5 ± 0.1) × 10−4g,i | (4.3 ± 0.3) × 10−4c | 24h |
APPIT11C/M17G/I18F/F34C | (1.5 ± 0.1) × 10−7b | (4.1 ± 0.3) × 106i | (6.0 ± 0.04) × 10−1f | (5.2 ± 0.1) × 10−3 | ||
APPIM17C/I18F/F34C | (6.1 ± 0.1) × 10−11f | 54h | (15.5 ± 0.2) × 106i | (1.0 ± 0.01) × 10−3i | (1.4 ± 0.02) × 10−4 | 74h |
KD1TFPI1K15R | (4.2 ± 0.6) × 10−5b | (8.9 ± 0.1) × 10−1 | ||||
KD1TFPI1K15R/I17C/I34C | (2.0 ± 0.1) × 10−7b | 215h | (5.1 ± 0.1) × 10−2 | 17h | ||
KD2Bikunin | (5. 1 ± 0.1) × 10−8b | (6.6 ± 0.4) × 10−3 | ||||
KD2BikuninF17C/P34C | (4. 5 ± 0.1) × 10−8b | 1.13h | (1.0 ± 0.1) × 10−3 | 6.6h |
a kcat was determined by HPLC-based inhibitor cleavage time course.
b Data were determined using Equation 1 (see “Experimental procedures”).
c Results were taken from Ref. 19.
d Data were determined using Equation 2 (see “Experimental procedures”).
e Data were determined using Equation 3 (see “Experimental procedures”).
f Data were determined using Equation 7 (see “Experimental procedures”).
g Results were taken from Ref. 45.
h Fold decrease relative to the parent protein scaffolds APPII18F, KD1TFPI1K15R, or KD2bikunin.
i Data were determined using Equation 8 (see “Experimental procedures”).