Table I. Estimated site occupancy of IgG1 and IgG4 Fc N-glycosylation sites from serum of healthy donors.
IgG1 | Unmodified peptide area | Labeled D18O peptide area | % Occupied | IgG4 | Unmodified peptide area | Labeled D18O peptide area | % Occupied |
---|---|---|---|---|---|---|---|
Donor 1A | 3.59E+05 | 2.21E+08 | 99.84% | Donor 1A | 1.31E+06 | 9.07E+08 | 99.86% |
Donor 1B | 2.84E+05 | 2.13E+08 | 99.87% | Donor 1B | 1.31E+06 | 8.76E+08 | 99.85% |
Donor 1C | 2.90E+05 | 2.10E+08 | 99.86% | Donor 1C | 1.00E+06 | 8.29E+08 | 99.88% |
Donor 2A | 2.55E+05 | 1.52E+08 | 99.83% | Donor 2A | 4.92E+06 | 2.35E+09 | 99.79% |
Donor 2B | 2.79E+05 | 1.43E+08 | 99.80% | Donor 2B | 3.66E+06 | 2.47E+09 | 99.85% |
Donor 2C | 2.24E+05 | 1.42E+08 | 99.84% | Donor 2C | 4.99E+06 | 2.38E+09 | 99.79% |
Donor 3A | 1.03E+05 | 5.70E+07 | 99.82% | Donor 3A | 1.33E+06 | 1.06E+09 | 99.87% |
Donor 3B | 7.66E+04 | 5.45E+07 | 99.86% | Donor 3B | 1.31E+06 | 9.84E+08 | 99.87% |
Donor 3C | 7.20E+04 | 5.50E+07 | 99.87% | Donor 3C | 2.60E+06 | 1.06E+09 | 99.75% |
Donor 4A | 8.96E+04 | 8.10E+07 | 99.89% | Donor 4A | 7.37E+05 | 8.02E+08 | 99.91% |
Donor 4B | 7.95E+04 | 7.87E+07 | 99.90% | Donor 4B | 5.88E+05 | 7.26E+08 | 99.92% |
Donor 4C | 7.41E+04 | 6.94E+07 | 99.89% | Donor 4C | 2.48E+05 | 5.94E+08 | 99.96% |
For each analysis, extracted ion chromatograms (EICs) of the unmodified peptide and the formerly glycosylated peptide labeled with 18O were generated, and the area under the curve was calculated. To estimate site occupancy, labeled (18O) peptide area was divided by the summed area of the labeled and unmodified peptide. Results of triplicate analyses are shown.