Figure - PMC

Skip to main content

An official website of the United States government

Here's how you know

Here's how you know

Official websites use .gov
A .gov website belongs to an official government organization in the United States.

Secure .gov websites use HTTPS
A lock ( ) or https:// means you've safely connected to the .gov website. Share sensitive information only on official, secure websites.

View full-text article in PMC

. 2019 Apr;29(4):613–625. doi: 10.1101/gr.246710.118

Search in PMC
Search in PubMed
View in NLM Catalog
Add to search

© 2019 Chathoth and Zabet; Published by Cold Spring Harbor Laboratory Press

This article, published in Genome Research, is available under a Creative Commons License (Attribution 4.0 International), as described at http://creativecommons.org/licenses/by/4.0/.

PMC Copyright notice

Figure 6. — BG3 cells display more long-range interactions compared with Kc167 cells. (A) Histogram showing the distances between two anchors of enriched contacts in the contact matrices (for BG3 and Kc167 cells). To keep consistency, we considered the down-sampled Kc167 Hi-C map, which had the same number of interactions as the BG3 map. (B,C) Distribution of chromatin loops at the borders of TADs in Kc167 and BG3 cells, showing that both cells have similar number of loops at TAD borders (Fisher's exact test P-value = 0.3). (D,E) Distribution of nonborder chromatin loops within TADs or between TADs in Kc167 and BG3 cells, showing that Kc167 cells display more loops within TADs compared with BG3 cells (Fisher's exact test P-value = 6.61 × 10⁻¹²).