Table 3. Correlation of EGFR mRNA expression and TNM stage.
Cancer type | GEO accession | Jetset probe | T (p value) | N (p value) | M (p value) | |||
---|---|---|---|---|---|---|---|---|
Median | Mean | Median | Mean | Median | Mean | |||
Bladder | GSE13507 | ILMN_1696521 | 0.56 | 0.47 | 0.08 | 0.31 | 0.66 | 0.53 |
Breast | GSE22226 | A_23_P215790 | 0.29 | 0.26 | ||||
GSE20685 | 211607_x_at | 0.92 | 0.98 | 0.59 | 0.60 | 0.48 | 0.14 | |
Colorectal | GSE5206 | 211607_x_at | 0.63 | 0.78 | 0.68 | 0.59 | 0.73 | 0.62 |
Gastric | GSE15081 | AGhsA201212 | 0.02* | 0.10 | ||||
AGhsB031519 | 0.35 | 0.97 | ||||||
Head-Neck | GSE2379 | 1537_at | 0.25 | 0.24 | 0.55 | 0.48 | ||
GSE65858 | ILMN_1696521 | 0.26 | 0.11 | 0.13 | 0.09 | 0.25 | 0.09 | |
Liver | GSE364 | NM_005228 | 0.46 | 0.73 | ||||
Lung | GSE5123 | X00588 | 0.63 | 0.65 | 0.23 | 0.12 | ||
GSE4573 | 211607_x_at | 0.56 | 0.45 | 0.60 | 0.38 | |||
Melanoma | GSE8401 | 211607_x_at | 0.32 | 0.25 | 0.38 | 0.73 | 0.12 | 0.08 |
Pancreas | GSE17891 | 211607_x_at | 0.97 | 0.46 | 0.87 | 0.42 | ||
Prostate | GSE6919 | 1537_at | 0.32 | 0.32 | 0.61 | 0.61 | ||
GSE10645 | GI_29725608-S | 0.34 | 0.28 | 0.84 | 0.51 |
P value < 0.05 was labeled with asterisk mark. T, N and M represented T stage, N stage and M stage, respectively. Median, group EGFR mRNA expression as “high” and “low” by median. Mean, group EGFR mRNA expression as “high” and “low” by mean.