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. 2019 Jan-Feb;51(1):31–39. doi: 10.4103/ijp.IJP_600_18

Table 4.

Energy, Inhibition constant and Root mean square deviation values obtained on docking of AD and L-DOPA as ligand with AQP, SERT and TrkA protein

Protein–ligand complex Binding energy (kcal/mol) RMSD (A) Inhibition constant (Ki) Final intermolecular energy (kcal/mol) vdW + Hbond + desolv energy (kcal/mol) Electrostatic energy (kcal/mol) Total internal energy (kcal/mol)
AQP-AD −8.88 147.416 307.80 nM −12.46 −12.47 0 −4.92
AQP- LDOPA −5.13 153.213 173.91 uM −7.22 −4.68 2.54 −2.59
SERT-AD −9.93 245.842 52.52 nM −13.51 −13.45 −0.06 −1.97
SERT-LDOPA 3.93 250.543 1.32 mM −6.02 −5.52 −0.5 −3.1
TrkA-AD 7.58 111.321 2.79 uM −11.16 −10.95 −0.21 −3.16
TrkA-LDOPA −6.0 115.214 39.97 uM −8.09 −6.57 −1.52 −2.8

AQP=Aquaporin, SERT=Serotonin transporter, TrKA=Tropomyosin receptor kinase, RMSD=Root mean square deviation