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. 2019 Mar 26;10:235. doi: 10.3389/fgene.2019.00235

Table 4.

Genes identified by TRAMP and human overlay.

S. no. Genes name Mouse Human GEO no. Array platform References
1. TNFSF UPREG UPREG GSE3325 GPL570 Varambally et al., 2005
2. RPL22 UPREG UPREG GSE55945 GPL570 Arredouani et al., 2009
3. EIF4 UPREG UPREG GSE55945 GPL570 Arredouani et al., 2009
4. SLC2A UPREG UPREG GSE69223 GPL570 Meller et al., 2016
5. LMO2/3 UPREG UPREG GSE69223 GPL570 Meller et al., 2016
6. KRT UPREG UPREG GSE3325 GPL570 Varambally et al., 2005
7. RPS21 UPREG UPREG GSE55945 GPL570 Arredouani et al., 2009
8. RPS19 UPREG UPREG GSE55945 GPL570 Arredouani et al., 2009
9. RPL21 UPREG UPREG GSE55945 GPL570 Arredouani et al., 2009
10. NEK UPREG UPREG GSE55945 GPL570 Arredouani et al., 2009
11. PPP1R3 DOWNREG UPREG GSE3325 GPL570 Varambally et al., 2005
12. GPR15 DOWNREG DOWNREG GSE3325 GPL570 Varambally et al., 2005
13. GPR45 DOWNREG DOWNREG GSE3325 GPL570 Varambally et al., 2005
14. TME DOWNREG DOWNREG GSE55945 GPL570 Arredouani et al., 2009
15. TGM4 DOWNREG DOWNREG GSE3325 GPL570 Varambally et al., 2005
16. KLF4 DOWNREG DOWNREG GSE3325 GPL570 Varambally et al., 2005
17. LRRN3 DOWNREG DOWNREG GSE69223 GPL570 Meller et al., 2016
18. WNT DOWNREG DOWNREG GSE69223 GPL570 Meller et al., 2016
19. SPRR1A DOWNREG DOWNREG GSE3325 GPL570 Varambally et al., 2005
20. TMEM DOWNREG DOWNREG GSE69223 GPL570 Meller et al., 2016

A list of 20 genes were identified by overlaying three human prostate cancer vs. benign prostate microarray studies with our TRAMP microarray. Ten of 10 genes were confirmed as upregulated whereas nine of 10 genes were downregulated in TRAMP tumors.