Table 4.
Bacterial species of interest | Primers | Expected size of amplified DNA fragments (bp) | ||
---|---|---|---|---|
Name | Sequence (5′-3′) | Length (bp) | ||
E coli | EcF | GGC GAA GAC AAA TTT YAC ATC RGT AAT G | 28 | 486 |
EcR | CAG GGT ACT CTC AGT CTA ATC AGT TGT CC | 29 | ||
Bacillus cereus | BcF | ACA GCA AAT CCA AAT TCA GCA GAA GG | 26 | 420 |
BcR | CTC CTT CAG AAT AWA CGC CAC CTG TT | 26 | ||
Bacillus subtilis | BsF | GAA TTT TGC AGC HAG ATC TTT TGC TTC TTG | 30 | 471 |
BsR | CCT YGG MAG AGA TAT GAT TAA CGG AAC ATT | 30 | ||
Bacillus thuringiensis | BthF | TTG CTA CTT TAG CTG CTT CTT CAA GAC CHG | 30 | 579 |
BthR | CCA GCG GAA CAA GCA GTT AGT GTR AA | 26 | ||
Enterococcus faecium | EfmF | AGT AGT CAA AGG TCA TCC CCT AAC TGC | 27 | 567 |
EfmR | TTT TGC ATC AAC TCA TCT GCA CGG TC | 26 | ||
Enterococcus faecalis | EfsF | CAA ACA TGC CGG AAA TCG ATG AAG AA | 26 | 311 |
EfsR | GAA GCC GCC ATT TGA TTG GAT GT | 23 |
Primer names, sequences, lengths and expected size of amplified DNA fragments (amplicons) are given for each primer. H = A + T + C, M = A + C, R = A + G, W = A + T and Y = C + T.