TABLE 1:
Human Module | Gene Targets | # of target mRNAs |
shRNA complexity |
---|---|---|---|
1 | Signaling pathway targets | 5,043 | 27,500 |
2 | Disease-associated targets | 5,412 | 27,500 |
3 | Cell surface, extracellular, DNA-binding targets | 4,922 | 27,500 |
Hit Criteria | Definition | Module # | # of hits | |
---|---|---|---|---|
Fold increase | ≥1.55 | 1 | 65 | |
# clones | ≥3 | 2 | 139 | |
Replicates | ≥2 of 3 | 3 | 198 | |
p38 regulated | Up- or down-regulated | |||
Metastasis | Involved? |