Table 2. Sequence of primer pairs and cycling parameters employed in PCR analysis.
CYTOB | TBR | TCS | TVW | |
---|---|---|---|---|
FORWARD PRIMER | GACCTCCCAGCTCCATCAAACATCTCATCTTGATGAAA | GAATATTAAACAATGCGCAG | CGAGAACGGGCACTTTGCGA | CTGAGTGCTCCATGTGCCAC |
REVERSE PRIMER | CTCAGATTCACTCGACGAGGGTAGTA | CCATTTATTAGCTTTGTTGC | GGACAAACAAATCCCGCACA | CCACCAGAACACCAACCTGA |
ANNEALING TEMPERATURE | 60°C | 55°C | 60°C | 62°C |
NUMBER OF CYCLES | 32 | 35 | 35 | 30a/35b |
AMPLICON SIZE | 439bp | 164bp | 315bp | 150bp |
CytoB, cytochrome B; TBr, T. brucei; TCS, T. congolense Savannah; TVW, T. vivax West.
aCycle number employed for analysis of DNA extracted from whole blood.
bCycle number used following DNA extraction from FTA card.