Table 1.

PPSS protein ratios and sequence coverage

PROTEIN	EC	MR	SA	SPN	ST	LFQ-SPN	LFQ-ST	LFQ coverarge	TMT coverage
Adamts13	0	0	0	0	0	−1.27	−0.47	12.6	1.6
Adipoq	−0.82	−1.01	−0.72	−0.37	−0.69	−0.16	−1.56	26.7	24.7
Angpt2	0.09	0.07	0.14	−0.67	0.63	0	2.79	11.9	7.5
Angptl3	−1.5	−0.2	0.36	−0.1	−0.03	−3.01	−0.49	35.8	9.9
Apcs	1.56	3.57	3.88	2.24	3.13	2.49	2.77	80.4	75.4
Apoa1	−0.63	−0.92	−1.01	−0.27	−0.89	−0.95	−1.31	87.5	82.6
Axl	0	0	0	0	0	1.65	2.19	16	0
C1qa	−1.11	0.34	0.23	−0.5	0.54	−0.29	0.94	34.3	44.9
C1qb	−1.17	0.29	0.21	−0.45	0.68	−0.43	1.07	36.8	43.1
C1qc	−0.9	0.44	0.36	−0.45	0.76	−0.51	0.37	30.9	25.2
C2	0.01	0.35	0.36	0.23	1.41	1.28	1.02	60	41.7
C3	0.06	0.83	0.65	0.32	0.46	0	0.18	89.4	79.9
C4b	−0.29	0.56	0.99	0.19	0.85	0.15	0.46	69.3	66.6
C5	−0.65	−0.35	−0.12	−0.45	−0.46	−0.85	−0.94	69.1	63.4
C8a	−0.59	−0.15	−0.27	−0.34	−1.02	−0.65	−1.77	72.4	68.1
C8b	−0.55	−0.09	−0.25	−0.31	−1.04	−0.39	−1.53	64.5	61.3
C8g	−0.46	0.06	−0.07	−0.25	−0.52	−0.67	−1.66	76.2	81.2
C9	−0.55	−0.42	−0.46	−0.65	−0.7	−0.95	−1.23	64.8	58.8
Camp	1.77	0.33	1.77	1.15	2.26	1.99	1.48	36	29.7
Ccl8	0.15	1.19	1.22	−0.4	1.96	0	−2	58.8	58.8
Cd14	2.79	1.89	1.26	0.47	3.62	6.27	7.36	43.4	53.8
Clu	−0.25	−0.27	0.17	−0.28	0.63	−0.22	0.25	50.9	47.1
Colec11	−0.57	−0.59	0.06	−0.67	−1.58	−2.25	−3.61	27.6	13.6
Crp	1.31	0.92	0.51	0.8	0.87	−0.01	0.39	54.2	74.7
F10	−0.5	0.1	0.09	−0.23	−0.65	−0.56	−1.14	36.4	43
F11	−0.3	1.16	1.3	−0.22	1.83	1.46	1.59	34.6	33.2
F12	−0.28	−0.48	−0.36	−0.37	−0.19	−0.54	−0.23	44.2	33.5
F13a1	−0.74	−1.04	−1.03	−0.63	−1.79	−1.6	−3.01	60.4	56.7
F13b	−0.78	−0.89	−0.83	−0.69	−2.05	−1.92	−3.41	53.1	47.8
F2	−0.45	−0.06	0.1	0.07	−0.43	−0.79	−1.27	56	51
F5	−0.14	0.43	0.7	−0.05	0.29	−0.26	0.35	40.3	38.6
F7	−0.52	0.91	1.03	0.4	0.09	−0.82	−0.37	35.9	37.9
F8	−0.2	1.13	1.33	0.36	0.62	−0.78	0.74	8.1	4.4
F9	−0.38	0.64	0.79	−0.12	0.47	−0.47	0.35	41.8	28
Fcn1	−0.61	−0.95	−0.49	−0.57	−1.24	−1.18	−2.42	40.4	41.6
Fth1	0.28	0.55	0.32	−0.96	4.14	9.39	8.88	71.4	53.8
Ftl1	0.29	0.09	0.34	−0.88	3.89	4.82	4.29	58.5	65
Grn	1.72	2.26	2.23	1.31	2.79	5.12	5.79	59.1	47.2
Gsn	−0.76	−1.39	−1.3	−0.93	−1.19	−1.28	−1.67	45.1	34.9
Icam1	1.62	0.48	0.55	0.16	2.11	1.13	1.85	28.3	30.2
Igf1	−1.27	−0.6	−0.78	−1.04	−1.56	−1.67	−8.11	27.5	18.3
Igfals	−1.39	−1.71	−1.09	−0.82	−2.1	−1.87	−3.35	55.9	44.3
Igfbp1	1.73	2.03	1.47	0.81	4.31	0	0	54.8	39.7
Igfbp2	−0.44	−0.52	−1.47	−0.98	0.6	0	−3.65	59.3	36.4
Igfbp3	−0.93	−0.6	−0.62	−0.62	−1.69	−3.02	−4.47	39.7	39.7
Igfbp4	−0.42	0.7	0.58	−0.68	0.09	0	0	33.1	25.2
Igfbp5	−1.07	−1.22	−0.64	−0.83	−0.25	−2.42	−6.22	45.4	19.2
Il18bp	−0.4	0.08	0.03	0.32	1.75	2.58	3.57	33.2	19.2
Il1r2	0.12	0.39	0.5	−0.5	2.1	0.31	1.1	28	24.1
Il1rap	−0.66	−1.11	−1.1	−0.84	−1.32	−0.65	−1.2	29.6	26.5
Il1rn	0.48	0.95	0.47	−0.13	2.61	0	0	60.7	19.7
Il2rg	0.48	−0.02	−0.23	−0.2	1.63	0.87	2.01	13	15.2
Klkb1	−0.83	−1.56	−1.61	−0.83	−1.82	−1.1	−2.21	63.5	63.3
Kng1	−0.19	−0.08	0.44	−0.07	−0.07	−0.73	−0.35	59.5	52.8
Lbp	1.77	2.01	1.81	1.63	1.86	1.79	1.09	45.5	31.8
Lcn2	3.36	4.02	3.55	2.05	4.29	6.7	6.88	46	43
Ltf	1.85	1.35	1.98	0.9	2.13	1.4	2.22	60	59.3
Lyz2	−0.12	0.83	1.5	−0.46	1.93	−0.81	1.01	45.3	27
Masp1	−0.68	−0.26	−0.13	−0.18	−0.39	−1.22	−0.6	43.8	41.9
Masp2	−0.59	−0.17	−0.07	−0.45	−0.85	−1.12	−0.61	62.3	51.5
Mbl2	−0.89	−2.36	−2	−0.65	−2.19	−0.4	−1.99	51.2	51.2
Mertk	−0.41	0.17	−0.54	−0.32	0.65	−0.94	0.87	11.7	7.2
Mpo	0.86	1.29	1.15	0.6	3.17	0	9.1	39	28.1
Pf4	−2.14	−1.57	−1.48	−1.09	−1.96	0.02	−3.49	20	28.6
Pglyrp1	1.18	2.15	1.28	1.57	2.47	0	1.48	45.6	34.6
Pigr	0.16	−0.42	0.54	−0.3	2.29	1.16	2.75	34.2	14
Plg	−0.49	−0.06	−0.08	−0.19	−0.86	−1.27	−1.31	76.2	77.1
Proc	−0.47	0.12	0.6	0.11	−0.07	−1.01	−0.56	36.7	20.7
Procr	1.21	0.35	0.42	−0.47	2.85	0.77	1.55	23.6	15.3
Pros1	−0.11	0.62	0.21	−0.05	0.3	0.02	−0.08	27.9	27.1
Proz	−0.9	0.19	0.77	0	0.03	−0.84	−1.76	41.1	45.6
S100a8	2.46	2.72	2.38	2.67	3.06	4.47	3.22	49.4	80.9
S100a9	1.91	2.24	1.66	1.91	2.73	5.26	3.22	38.9	38.9
Saa1	3.73	4.54	3.58	3.65	3.87	3.71	2.37	53.3	43.4
Saa2	3.94	4.91	3.57	4.01	3.9	3.77	3.05	41	41.8
Sele	1.04	0.73	0.59	0.07	0.24	0	0	9.8	6
Sell	−0.15	−0.21	−0.2	−0.24	1	−0.03	1.09	16.7	18.5
Selp	1.04	1.19	1.37	0.16	0.97	−0.06	−0.05	11.3	4
Serpina1a	−0.53	−0.52	−0.83	−0.51	−0.97	−1.1	−1.21	18.2	14.3
Serping1	0.32	0.55	0.58	0.06	0.83	0.58	0.36	58.9	48.4
Tie1	0.16	0.66	0.63	0.26	1.11	0.96	2.19	13.6	1.6
Vcam1	0.38	−0.15	−0.08	−0.35	1.54	0.99	1.73	50.9	46.8
Vtn	0.11	0.08	0.24	0.14	−0.6	−0.39	−1.49	56.5	51.9
Vwf	1.13	1.38	1.66	0.09	0.84	0.44	0.56	32.5	21.8