Figure 3.
Mapping Fragmentation of α-Hydroxy Fatty Acid Ceramides. (a) Original experimental (dark grey) and in-silico (light grey) MS/MS spectra for Cer[AS] d18:1_24:0 [M-H]−. (b) All annotation spectral peaks for sphingoid neutral loss (turquoise), sphingoid fragment (orange), alkyl neutral loss (green), alkyl fragment (magenta), fragment (blue), and neutral loss (purple) generated from 8 unique Cer[AS] [M+Ac-H]− species. (c) Generated Cer[AS] d18:1_24:0 [M-H]− spectra after addition of annotation spectral peaks found in at least 75% of annotation spectra for each rule type. (d) Original experimental (dark grey) and generated in-silico (colored) spectra for Cer[AS] d18:1_24:0 [M-H]−.
