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. 2019 Apr 3;9:5581. doi: 10.1038/s41598-019-41936-1

Table 1.

Features of LusHSF genes and proteins in the flax genome.

HSF ID Phytozome HSF Location Strand Length pI GRAVY Mw (kD) Subcel loc and no. NN
locus group Chr* Start* End* Gene CDS Protein
LushsfA1a Lus10011065 A1a Lu08 18101211 18103152 reverse 1941 1377 458 4.82 −0.578 50.06 nu: 14
LushsfA1b Lus10040911 A1b Lu15 8448889 8450468 forward 1579 1377 458 5.65 −0.583 50.64 nu: 14
LushsfA1c Lus10000312 A1c Lu08 16643985 16645926 reverse 1941 1377 458 4.95 −0.602 50.01 nu: 14
LushsfA1d Lus10030956 A1d Lu09 5719143 5722728 reverse 3585 1416 471 4.90 −0.778 52.43 nu: 14
LushsfA1f Lus10040091 A1f Lu07 4032070 4035485 forward 3415 1416 471 4.72 −0.770 52.11 nu: 14
LushsfA2a Lus10013797 A2a Lu11 2671577 2672762 reverse 1185 1026 341 5.01 −0.682 38.43 nu: 14
LushsfA2b Lus10039134 A2b Lu14 18116147 18117412 forward 1265 1110 369 5.22 −0.649 41.46 nu: 13, cp: 1
LushsfA3a Lus10023866 A3a Lu08 4723718 4725601 forward 1883 1326 441 4.73 −0.570 49.81 nu: 14
LushsfA3b Lus10014369 A3b Lu06 14835072 14836968 forward 1896 1341 446 4.71 −0.561 50.31 nu: 14
LushsfA4a Lus10007318 A4a Lu15 2083596 2084949 reverse 1353 1242 413 4.97 −0.648 46.38 nu: 14
LushsfA4b Lus10015237 A4b Lu12 2940951 2942258 reverse 1307 1212 403 5.75 −0.880 45.68 nu: 14
LushsfA4c Lus10029269 A4c Lu03 8165193 8166105 reverse 912 801 266 6.01 −0.623 30.58 nu: 13, cp: 1
LushsfA4d Lus10005420 A4d Lu07 17858515 17860349 forward 1834 1473 490 7.92 −0.602 55.15 nu: 5, cp: 1, cy: 2, mt: 2, vac: 2, er: 1, gb:1
LushsfA6a Lus10006618 A6a Lu08 22068530 22070272 forward 1742 1185 394 5.56 −0.734 44.47 nu: 14
LushsfA6b Lus10039376 A6b Lu10 3252307 3253927 forward 1620 1122 373 5.11 −0.650 42.35 nu: 13, cp: 1
LushsfA7a Lus10000492 A7a Lu14 4577433 4578881 forward 1448 1125 374 5.52 −0.737 42.24 nu: 13
LushsfA7b Lus10014698 A7b Lu01 26411220 26412688 reverse 1468 1137 378 5.51 −0.780 42.96 nu: 14
LushsfA7c Lus10022083 A7c unmapped - - reverse 1410 1131 376 5.75 −0.744 43.11 nu: 14
LushsfA8a Lus10003707 A8a Lu03 4843561 4845792 reverse 2231 1122 373 4.97 −0.703 42.42 nu: 13, per: 1
LushsfA8b Lus10001591 A8b Lu04 8648138 8650354 reverse 2216 1122 373 4.78 −0.724 42.72 nu: 13, per: 1
LushsfA9a Lus10027627 A9a Lu11 14143005 14144526 forward 1521 1422 473 5.03 −0.697 53.45 nu: 14
LushsfA9b Lus10011941 A9b Lu10 7901682 7903160 reverse 1478 1377 458 5.19 −0.696 51.76 nu: 14
LushsfB1a Lus10019348 B1a Lu02 1244140 1247030 forward 2890 273 822 4.81 −0.995 30.15 nu: 14
LushsfB1c Lus10009351 B1c Lu13 5055375 5058490 forward 3115 852 283 4.84 −0.991 31.44 nu: 11, cp: 1, cy: 1, pm: 1
LushsfB2a Lus10014994 B2a Lu14 19043189 19044240 forward 1051 924 307 5.58 −0.694 33.51 nu: 14
LushsfB2b Lus10008007 B2b Lu07 6384378 6385552 reverse 1174 1098 365 4.80 −0.554 39.28 nu: 13, per: 1
LushsfB2d Lus10024508 B2d Lu09 7452072 7454461 reverse 2389 1227 408 5.27 −0.499 44.34 nu: 13, per: 1
LushsfB4a Lus10042646 B4a Lu09 17698210 17699546 reverse 1336 1233 410 8.25 −0.656 45.07 nu: 14
LushsfB4b Lus10036062 B4b Lu01 503457 505257 reverse 1800 951 316 6.21 −0.899 36.54 nu: 14
LushsfB4c Lus10001133 B4c Lu10 13207020 13208344 reverse 1324 1215 404 7.84 −0.704 44.83 nu: 14
LushsfB5a Lus10011185 B5a Lu15 837963 839813 forward 1850 615 204 9.32 −0.812 23.78 nu: 13.5, cy_nu: 0.5
LushsfB5b Lus10018488 B5b Lu08 23772105 23774084 reverse 1979 603 200 9.27 −0.668 23.19 nu: 12.5, cy_nu: 7, cp 1
LushsfC1a Lus10023636 C1a Lu11 15833912 15834932 forward 1020 921 306 7.78 −0.715 34.63 nu: 14
LushsfC1b Lus10034907 C1b Lu12 8134272 8135285 forward 1013 924 307 6.98 −0.695 34.46 nu: 14

Chromosomal location estimated as per You et al.10.

pI: isoelectric point, GRAVY: Grand average of hydropathicity, Mw(kD): Molecular weight in kilo Dalton, Subcel loc and no. NN: Subcellular location and number of nearest neighbours, nu: nucleus, mt: mitochondria, cp: chloroplast, per: peroxisome, cy: cytosol, vac: vacuole, ER: endoplasmic reticulum, gb: golgi body, cy_nu: dual localization cytosol and nucleus, pm: plasma membrane.