Table II.

Stabilities and functional annotations of the 7 modules of TCGA dataset.

Module	Color	Module size, n	mRNA	lncRNA	Preservation Z-score	Module annotation
1	Blue	336	334	2	9.7094	Pattern specification process
2	Brown	331	328	3	1.2017	Epithelium development
3	Green	318	288	30	19.0215	Immune response
4	Grey	2,856	2,822	34	4.2851	Cell-cell signaling
5	Red	250	213	37	13.2273	Digestive system process
6	Turquoise	956	910	46	27.4163	Cell adhesion
7	Yellow	326	294	32	15.7692	Digestion

Z<5 indicates that the module is unstable; Z>5 indicates that the module is stable, and Z>10 indicates that the module is highly stable. Module annotation indicates the functional terms enriched for the modules. TCGA, The Cancer Genome Atlas; lncRNA, long non-coding RNA.