Table 5.
Mapping patterns of sRNAs from different gymnosperms against conserved and novel miRNA precursors predicted in A. angustifolia.
| miRNA precursor | Cunninghamia lanceolata | Ginkgo biloba | Picea abies | Taxus mairei | Taxus wallichiana | Araucaria angustifolia | |
|---|---|---|---|---|---|---|---|
| Conserved miRNAs | Aang-miR156 | 283,795 | 4,702 | 230 | 21,967 | 1,574 | 15,118 |
| Aang-miR159ab | 1 | 52 | 244 | 28 | 1 | 91,693 | |
| Aang-miR160 | 38 | 269 | 270 | 48 | 2 | 80 | |
| Aang-miR166abcde | 4,983 | 719,138 | 433,596 | 21,426 | 4,574 | 1,063,754 | |
| Aang-miR167abcd | 33,472 | 5,437 | 955 | 779 | 45 | 13,848 | |
| Aang-miR168 | 5,639 | 37,003 | 1,184 | 27,150 | 59,574 | 6,801 | |
| Aang-miR169abcd | 0 | 28 | 0 | 0 | 0 | 2,887 | |
| Aang-miR171abc | 17 | 10,214 | 89 | 3 | 4 | 491 | |
| Aang-miR390a | 395 | 8,922 | 1,974 | 164 | 52,965 | 1,999 | |
| Aang-miR394 | 0 | 11,081 | 312 | 4 | 0 | 611 | |
| Aang-miR395ab | 0 | 2 | 0 | 2 | 0 | 2,722 | |
| Aang-miR396 | 102 | 4,147 | 254 | 794 | 1,166 | 5,246 | |
| Aang-miR399abcde | 2 | 20 | 3 | 28 | 0 | 136 | |
| Aang-miR408 | 325 | 47 | 0 | 190 | 22,972 | 94 | |
| Aang-miR529abcde | 0 | 77 | 58 | 174 | 11 | 1,086 | |
| Aang-miR1314abcd | 0 | 64,219 | 20 | 0 | 1 | 6,904 | |
| Novel miRNAs | Aang-nmiR006 | 0 | 116 | 0 | 24 | 1,151 | 110,647 |
| Aang-nmiR014 | 1,301 | 295 | 24 | 426 | 1,085 | 32,638 | |
| Aang-nmiR025 | 355 | 3,118 | 242 | 2,441 | 787 | 5,040 | |
| Aang-nmiR028 | 696 | 564 | 3 | 68 | 11,953 | 3,084 | |
| Aang-nmiR031 | 0 | 126,984 | 42,987 | 1,402 | 163 | 1,751 | |
| Aang-nmiR034 | 0 | 4 | 0 | 1,470 | 2,148 | 1,869 | |
| Aang-nmiR046 | 0 | 31 | 0 | 41 | 742 | 442 | |
| Aang-nmiR055 | 345 | 409 | 128 | 46 | 1,402 | 618 | |
| Aang-nmiR063 | 43 | 252 | 57 | 60 | 357 | 454 |