Table 6.
Predicted putative targets of novel and conserved miRNAs in A. angustifolia.
| miRNA | Target acc. | Expectation | Inhibition | Annotation |
|---|---|---|---|---|
| Aang-miR156 | 1931415 | 2.5 | Cleavage | squamosa promoter-binding 20 |
| 796092 | 3 | Cleavage | exocyst complex component EXO70A1-like | |
| Aang-miR159 | 977162 | 2.5 | Cleavage | transcription factor GAMYB |
| Aang-miR166 | 1704393 | 2 | Cleavage | homeodomain-leucine zipper transcription factor HB-3 |
| Aang-miR167 | 1066318 | 2.5 | Cleavage | zinc finger ZAT4-like |
| Aang-miR171 | 2163525 | 1.5 | Cleavage | scarecrow 6 |
| Aang-miR390 | 153786 | 2.5 | Cleavage | ethylene receptor 2-like |
| Aang-miR395 | 968805 | 3 | Cleavage | ATP sulfurylase 2 |
| Aang-miR399 | 1917714 | 2.5 | Cleavage | probable apyrase 6 |
| Aang-miR529 | 1928068 | 2 | Cleavage | U5 small nuclear ribonucleoprotein 40 kDa isoform X1 |
| Aang-miR1314 | 1949852 | 2.5 | Translation | transcription factor ice1 |
| Aang-nmiR003 | 799146 | 2.5 | Translation | diterpene synthase |
| 2042481 | 2.5 | Cleavage | disease resistance RPP13 4 | |
| Aang-nmiR005 | 1950381 | 2.5 | Translation | probable receptor kinase At1g49730 |
| 1063530 | 2.5 | Cleavage | G-type lectin S-receptor-like serine threonine- kinase At2g19130 | |
| Aang-nmiR006 | 1926825 | 0 | Cleavage | disease resistance RGA3 |
| 2436549 | 0 | Cleavage | LRR and NB-ARC domain disease resistance | |
| 1580639 | 1 | Cleavage | NBS-LRR disease resistance | |
| 2026350 | 1 | Cleavage | disease resistance RPM1-like | |
| Aang-nmiR009 | 225523 | 3 | Cleavage | disease resistance RGA3 |
| 967108 | 3 | Cleavage | disease resistance RGA2-like isoform X1 | |
| 1681946 | 1.5 | Cleavage | disease resistance RPM1-like | |
| Aang-nmiR012 | 1601456 | 2 | Cleavage | TMV resistance N-like |
| Aang-nmiR017 | 2007770 | 2.5 | Cleavage | NBS-LRR |
| 2105514 | 2.5 | Cleavage | disease resistance TAO1-like | |
| 2105518 | 2.5 | Cleavage | TMV resistance N-like | |
| Aang-nmiR018 | 811798 | 2.5 | Translation | disease resistance (TIR-NBS-LRR class) |
| 811797 | 2.5 | Translation | TMV resistance N-like | |
| 160015 | 2.5 | Translation | disease resistance (TIR-NBS-LRR class) | |
| Aang-nmiR019 | 1997048 | 2.5 | Translation | TMV resistance N-like |
| Aang-nmiR021 | 2023865 | 1.5 | Cleavage | disease resistance RPM1-like |
| Aang-nmiR022 | 2023865 | 1.5 | Cleavage | disease resistance RPM1-like |
| Aang-nmiR025 | 869457 | 1.5 | Cleavage | senescence-associated |
| 1863722 | 0 | Cleavage | cytochrome P450 like TBP | |
| Aang-nmiR027 | 169430 | 2.5 | Cleavage | cyclin-T1-3-like isoform X1 |
| 1942123 | 2.5 | Cleavage | cyclin-T1-5 | |
| Aang-nmiR029 | 1580639 | 2.5 | Translation | NBS-LRR disease resistance |
| Aang-nmiR031 | 2026350 | 2.5 | Translation | disease resistance RPM1-like |
| Aang-nmiR038 | 1946613 | 1.5 | Translation | disease resistance RPP13 4 |
| Aang-nmiR039 | 1799491 | 2.5 | Cleavage | disease resistance RGA1 |
| 2509763 | 2.5 | Cleavage | resistance family | |
| Aang-nmiR051 | 2060073 | 0 | Cleavage | probable xyloglucan endotransglucosylase hydrolase 10 |
| 706255 | 1.5 | Cleavage | probable xyloglucan endotransglucosylase hydrolase 32 | |
| Aang-nmiR052 | 984263 | 2.5 | Translation | L-ascorbate oxidase homolog |
| Aang-nmiR054 | 1236307 | 3 | Cleavage | L-ascorbate oxidase |
| 2324731 | 2.5 | Cleavage | cell division cycle 123 homolog | |
| Aang-nmiR059 | 2131961 | 2.5 | Cleavage | target of AVRB operation1 |
| 2174518 | 0 | Cleavage | SUPPRESSOR OF npr1- CONSTITUTIVE 1-like | |
| 2151817 | 1.5 | Cleavage | TMV resistance N-like isoform X2 | |
| Aang-nmiR062 | 818026 | 0 | Cleavage | TMV resistance N-like |
| 2126093 | 0 | Cleavage | disease resistance TAO1-like | |
| 1820645 | 0 | Cleavage | Disease resistance (TIR-NBS-LRR class) family | |
| Aang-nmiR064 | 1749835 | 2.5 | Cleavage | disease resistance (TIR-NBS-LRR class) |
| 2031676 | 2.5 | Cleavage | TMV resistance N-like |