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. Author manuscript; available in PMC: 2020 Jan 31.
Published in final edited form as: J Phys Chem B. 2019 Jan 15;123(4):901–908. doi: 10.1021/acs.jpcb.8b11905

Table 3.

Solvation Free Energies (kcal/mol) and Percentages of New Configurations Sampled during MD Simulations (in Parentheses) with QM/MM ML Models (Symmetry Functions and Power Spectrum) Updated Using Output-Check (Model 1), k-Means Clustering (Model 2) or Gaussian Model (Model 3) to Detect New Configurations.

Molecules Symmetry Functions
Power Spectrum
Model 1 Model 2 Model 3 Model 1 Model 2 Model 3
Acetic acid −6.8 (0.3%) −6.7 (1.1%) −7.0 (20.3%) −6.9 (0.4%) −6.8 (1.0%) −7.3 (6.2%)
Acetamide −11.4 (0.1%) −11.3 (1.2%) −11.6 (16.0%) −10.9 (0.2%) −10.9 (0.9%) −11.7 (3.8%)
Acetone −3.6 (0.1%) −3.9 (1.1%) −3.8 (5.0%) −3.9 (0.2%) −3.8 (1.0%) −3.9 (5.7%)
Benzene −0.3 (0.2%) −0.2 (2.0%) −0.3 (1.8%) −0.2 (0.3%) −0.5 (1.6%) −0.6 (4.4%)
Ethanol −4.6 (0.1%) −4.6 (1.3%) −4.3 (40.0%) −4.0 (0.4%) −4.0 (1.0%) −4.6 (9.8%)
Methylamine −3.8 (0.4%) −4.0 (1.7%) −4.5 (7.2%) −2.4 (0.4%) −2.2 (1.3%) −2.5 (10.2%)