Table 4.
List of genomic regions of extended homozygosity detected in Jinhua pigs.
| CHR | Start (bp) | End (bp) | Length (bp) | Mean | iHS| value | SNPs | Genes |
|---|---|---|---|---|---|---|
| 2 | 41304430 | 42207694 | 903264 | 2.56 | 94 | 15 |
| 3 | 33443006 | 37063749 | 3620743 | 2.01 | 174 | 9 |
| 7 | 11825920 | 12271785 | 445865 | 1.24 | 45 | 2 |
| 7 | 100881377 | 100912691 | 31314 | 2.94 | 16 | 1 |
| 10 | 67900330 | 67900420 | 90 | 0.00 | 3 | 0 |
| 12 | 2147273 | 2619710 | 472437 | 1.51 | 59 | 12 |
| 13 | 134231214 | 137556583 | 3325369 | 1.80 | 133 | 28 |
| 15 | 25936404 | 27246878 | 1310474 | 1.24 | 62 | 1 |
| 17 | 40820642 | 40961202 | 140560 | 1.00 | 6 | 1 |
| 17 | 43470563 | 44993583 | 1523020 | 1.71 | 141 | 7 |
| 18 | 45198816 | 46247949 | 1049133 | 1.66 | 91 | 29 |
CHR, chromosome; SNPs, number of SNPs in each genomic region; Genes, number of genes in each genomic region.