Table 3.
Rumen metagenome data assembly analysis statistics using in-house Perl scripts.
| Sample | HF |
LF |
||
|---|---|---|---|---|
| BF (0h)1 | AF (4h)2 | BF (0h) | AF (4h) | |
| Number of Contigs | 1.24 × 105 | 1.45 × 105 | 1.26 × 105 | 1.29 × 105 |
| Assembly Length (bp) | 1.67 × 108 | 1.91 × 108 | 1.72 × 108 | 1.77 × 108 |
| N50 (bp) | 1,632 ± 53 | 1,556 ± 76 | 1,643 ± 95 | 1,664 ± 147 |
| N90 (bp) | 621 ± 7.55 | 618 ± 5.69 | 632 ± 4.04 | 631 ± 11.67 |
| Max Contig (bp) | 1.45 × 105 | 1.48 × 105 | 1.60 × 105 | 1.39 × 105 |
| Mix Contig (bp) | 500 ± 0.00 | 500 ± 0.00 | 500 ± 0.00 | 500 ± 0.00 |
| Average Size (bp) | 1,352 ± 41.79 | 1,321 ± 33.53 | 1,365 ± 52.12 | 1,396 ± 100.24 |
1BF (0h), before feeding (0 h); 2AF (4h), after feeding (4 h).