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. 2019 Apr 5;13(Suppl 2):38. doi: 10.1186/s12918-019-0694-y

Table 3.

Optimal parameter settings for GNE model

Dataset Learning rate Batch size Embedding dimension (d) Epoch Negative samples
Yeast 0.005 256 128 20 10
E. coli 0.002 128 128 20 10