Table 2. Details of SAXS data collection and analysis.
| PmScsCΔN | PmScsC | PmScsCΔLinker | |
|---|---|---|---|
| SASBDB ID | SASDEK4 | SASDER4 | SASDEQ4 |
| Data-collection parameters | |||
| Instrument | SAXS/WAXS, Australian Synchrotron | ||
| Beam geometry | Point | ||
| Wavelength (Å) | 1.033 | ||
| Sample-to-detector distance (m) | 3.330 | ||
| q-range (Å−1) | 0.008–0.363 | ||
| Temperature (K) | 283 | ||
| Absolute intensity calibration | Water | ||
| Exposure time (s) | 38 (38 × 1 s exposures) | ||
| Configuration | Concentration series from 96-well plate | ||
| Protein concentration range (mg ml−1) | 0.1–10.0 | ||
| Sample details | |||
| Extinction coefficient [A 280, 0.1%(w/v)] | 0.643 | 0.528 | 0.558 |
| Partial specific volume (cm3 g−1) | 0.742 | 0.741 | 0.743 |
| Contrast, Δρ (1010 cm−2) | 2.79 | 2.80 | 2.78 |
| Molecular mass (from sequence) (kDa) | 20.2 | 24.8 | 23.4 |
| Protein concentration (mg ml−1) | 0.50† | 0.1, 0.5, 2.0, 5.0, 10.0 | 0.1, 0.5, 2.0, 5.0, 10.0 |
| Structural parameters | |||
| I(0) (from Guinier) (cm−1) | 0.004055 ± 0.00001 | — | — |
| R g (from Guinier) (Å) | 17.0 ± 0.1 | — | — |
| I(0) [from p(r)] (cm−1) | 0.004053 ± 0.00001 | — | — |
| R g [from p(r)] (Å) | 17.0 ± 0.1 | — | — |
| D max (Å) | 55 ± 2 | — | — |
| Porod volume (Å3) | 22200 ± 1000 | — | — |
| Molecular-mass determination | |||
| Molecular mass [from I(0)] (kDa) | 11 ± 2 | — | — |
| Molecular mass (from Porod) (kDa) | 19 ± 1 | — | — |
PmScsCΔN: I(0) = 0.00140 ± 0.00002 cm−1, R g = 16.9 ± 0.3 Å, M = 19.8 kDa (0.1 mg ml−1); I(0) = 0.004053 ± 0.000001 cm−1, R g = 17.0 ± 0.1 Å, M = 19.1 kDa (0.5 mg ml−1); I(0) = 0.01839 ± 0.00003 cm−1, R g = 17.1 ± 0.1 Å, M = 19.3 kDa (2.0 mg ml−1); I(0) = 0.05463 ± 0.00005 cm−1, R g = 17.2 ± 0.1 Å, M = 19.6 kDa (5.0 mg ml−1); I(0) = 0.10756 ± 0.00005 cm−1, R g = 17.0 ± 0.1 Å, M = 19.2 kDa (10.0 mg ml−1). Masses from the Porod volume are used as concentration estimates, yielding masses from I(0) inconsistent with the expected mass. The 0.5 mg ml−1 data were used for subsequent data analysis.