Table 1. Macromolecule-production information.
CdAppA | |
Source organism | C. difficile |
DNA source | C. difficile 630 chromosomal DNA |
Forward primer F_CdAppA† | ttctgttccagggaccagcaGGAGCTTTTGCAAACGTTAAAG |
Reverse primer R_CdAppA† | atatgtgaggagaaggcgcgTTATTCTACATACAGTTTAGACCAA |
Expression vector | pET-YSBLLIC3C |
Expression host | E. coli BL21(DE3) |
Complete amino-acid sequence of the construct produced | MGSHHHHHHSSGLEVLFQGPAGAFANVKEDSLASNIVYAPLYTYEKGNLVNYLAEKVDFKDSKELTIKLKSNLKWHDGKPITAEDVLFTFNTVLDEKQNSPSRQYLLVGEKPVKVEKIDDLTVKITLPTASESFLYGISKISPIPKHVFEGESNIAKSEKNNNPVGSGAFKFKEWKKGESIVFEKNADYFGGEPKADSIALKIIPNEASQEAALNNGEISLMKTSAEGYEKAKSNSNLQTYTYSEERLNYIVFNQNISNMANKEVRQALSYALNRNEMIESAYGKEGSVPAKSILVPEADFYTEEGVEGYDQDTNKAKDLLDKSGVKIDKLKIGYNTGRFGHKNYALVAQQELKKIGIEAEIVPYESKAFFNILFSNSTECDMYVNGYAWGLEPNPYRGMFETGQYCNQTKYSNAEIDALWEKGFTELNKEKREEIYKQIQQDISKDAPIYTIDYEQNLMAAQKNLKGIKDAKPSPAILFEDWSKLYVE |
CdOppA | |
Source organism | C. difficile |
DNA source | Synthetic coding sequence codon-optimized for E. coli expression |
Forward primer F_CdOppA† | ttctgttccagggaccagcaAGCAGCGGTGGCGACAAG |
Reverse primer R_CdOppA† | atatgtgaggagaaggcgcgTTACTCAATGGTCCAATCCGCG |
Expression vector | pET-YSBLLIC3C |
Expression host | E. coli BL21(DE3) |
Complete amino-acid sequence of the construct produced | MGSHHHHHHSSGLEVLFQGPASSGGDKDKKADTPKDGKVLVYGSNDYTSINPALYEHGEINSLIFNGLTAHDENNKVVPCLAKDWKFDEATNTYTFNLRDDVKWHDGEKFTANDVKFTIETIMNPDNASEIASNYEDITKIDVVNDNTIKITLKAPNTAMLDYLTVGVLPKHALEGKDIATDEFNQKPIGTGPFKLEKWDKGQSITLVKNSDYFVKEPGLDKVVFKIVPDDKAKAMQLKSGELDLAQITPKDMSNFEKDEKNFKVNIMKTADYRGILYNFNSKFFKDKKAKGLPNALSYAIDRKAIVDSVLLGHGVPAYSPLQMGPYNNPDIEKFEYNPEKAKQEIEKLGWKLGSDGIYEKEGTKLAFEITAGESDQVRVDMAKICAQQLKEIGVDAKAVVVTETDWANQDAHLIGWGSPFDPDDHTYKVFGTDKGANYSAYSNPTIDKILQKARETEDKDEKLKLYKQFQVEMTKDMPYTFIAYIDAIYVGKPNIKGLTPDTVLGHHGVGIFWNIADWTIE |
The upper-case sequence is complementary to the template DNA and the lower-case flanking sequence is complementary to the vector DNA for use in HiFi cloning.