Table 4. Structure solution and refinement.
Values in parentheses are for the outer shell.
| Crystal form | Monoclinic | Orthorhombic | Tetragonal |
|---|---|---|---|
| PDB entry/model used in molecular replacement | 1o2d | Monoclinic form | Orthorhombic form |
| Resolution range (Å) | 49.6–2.4 (2.5–2.4) | 33.0–2.1 (2.2–2.1) | 29.00–1.91 (2.00–1.91) |
| Completeness (%) | 78.88 (19.35) | 89.82 (32.73) | 94.83 (80.76) |
| σ Cutoff | None | None | None |
| No. of reflections used | 22218 | 39750 | 28792 |
| No. of reflections, working set | 21068 (402) | 37732 (1057) | 26795 (1997) |
| No. of reflections, test set | 1150 (21) | 2018 (55) | 1774 (127) |
| Final R cryst | 0.14 (0.30) | 0.15 (0.35) | 0.13 (0.29) |
| Final R free | 0.21 (0.35) | 0.20 (0.39) | 0.19 (0.35) |
| Cruickshank DPI | 0.20 | 0.23 | 0.14 |
| No. of non-H atoms | |||
| Protein | 5852 | 5994 | 3165 |
| Ions† | 1 | 1 | 95 |
| Coenzymes‡ | 79 | 48 | 31 |
| Other ligands§ | — | 14 | 12 |
| Water | 167 | 293 | 462 |
| Total | 6099 | 6350 | 3765 |
| R.m.s. deviations | |||
| Bonds (Å) | 0.003 | 0.005 | 0.008 |
| Angles (°) | 0.61 | 0.96 | 1.12 |
| Average B factors (Å2) | |||
| Protein | 66 | 45 | 41 |
| Ions† | 70 | 65 | 61 |
| Coenzymes‡ | 80 | 41 | 72 |
| Other ligands§ | — | 73 | 100 |
| Water | 57 | 49 | 52 |
| All atoms | 66 | 46 | 43 |
| Ramachandran plot | |||
| Favored regions (%) | 97.2 | 96.4 | 97.9 |
| Additionally allowed (%) | 2.8 | 3.5 | 2.1 |
| Outliers (%) | 0.0 | 0.1 | 0.0 |
| PDB code | 6c75 | 6c76 | 6c7l |