Table 1. Dissociation constant KD of substrate-binding proteins.
KD (µM) | |||||
---|---|---|---|---|---|
Protein* | Ligand | Freely-diffusing protein | Surface-tethered protein | KD WT protein¶ (µM) | |
OpuAC(V360C/N423C) | Glycine betaine | 3.4 ± 0.4† | 3.1‡ | 4–5 (Wolters et al., 2010) | |
OppA(A209C/S441C) | RPPGFSFR | 7.0 ± 1† | 14 ± 5# | 5 ± 3# | |
SBD2(T369C/S451) | Glutamine | 1.2 ± 0.2§ | 0.5‡ | 0.9 ± 0.1 (Gouridis et al., 2015) | |
SBD1(T159C/G87C) | Asparagine | 0.34 ± 0.03§ | 0.3‡ | 0.2 ± 0.0 (Gouridis et al., 2015) | |
MalE(T36C/S352C) | Maltose | 1.7 ± 0.3† | 2.2‡ | 1-2 (Hall et al., 1997a, Kim et al., 2013) | |
MalE(T36C/S352C) | Maltotriose | 0.6 ± 0.2† | 0.9‡ | 0.2-2 (Hall et al., 1997a, Kim et al., 2013) |
*. KD could not be determined reliably for labeled PsaA due to background metal contamination.
†. Population of the closed conformation in the presence of a ligand concentration was determined using solution-based smFRET. The for a one-binding site model. Data corresponds to mean ± s.d. of duplicate experiments with the same protein sample.
#. Figure 2—figure supplement 2.
¶. The KD values of wildtype (WT) proteins are obtained from the indicated references.