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. Author manuscript; available in PMC: 2020 Apr 4.
Published in final edited form as: Cell Stem Cell. 2019 Mar 14;24(4):608–620.e6. doi: 10.1016/j.stem.2019.02.009

KEY RESOURCES TABLE

REAGENT or RESOURCE SOURCE IDENTIFIER
Antibodies
PE-Mac-1 eBioscience Cat# 12-0112-83 RRID: AB_2734870
PE-Gr-1 eBioscience Cat# 12-5931-83 RRID: AB_466046
eFIuor 450-Gr-1 eBioscience Cat# 48-5931-82 RRID: AB_1548788
PE-B220 eBioscience Cat# 12-0452-83 RRID: AB_465672
APC-B220 eBioscience Cat# 17-0452-82 RRID: AB_469395
PE-CD3e BD Biosciences Cat# 553064 RRID: AB_394597
APC-eFluor 780-CD3e eBioscience Cat# 47-0031-82 RRID: AB_11149861
PE-CD45.1 eBioscience Cat# 12-0453-82 RRID: AB_465675
FITC-CD45.2 BD Biosciences Cat# 553772 RRID: AB_395041
Biotin-Lineage Panel antibody BioLegend Cat# 133307 RRID: AB_11124348
PE-Cy7-Sca-1 BD Biosciences Cat# 558162, RRID: AB_647253
APC-Fluor 780-c-Kit eBioscience Cat# 47-1171-82 RRID: AB_1272177
PE-Cy5-CD150 BioLegend Cat# 115911 RRID: AB_493599
PE-CD150 eBioscience Cat# 12-1502-80 RRID: AB_1548767
Alexa Fluor 647-CD150 BioLegend Cat# 115918 RRID: AB_2239178
FITC-CD48 eBioscience Cat# 11-0481-82 RRID: AB_465077
PE-CD48 BioLegend Cat# 103405 RRID: AB_313020
Alexa Fluor 647-CD34 BD Biosciences Cat# 560230 RRID: AB_1645200
FITC-CD16/32 BD Biosciences Cat# 553144 RRID: AB_394659
PE-Cy5-CD127 eBioscience Cat# 15-1271-82 RRID: AB_468793
Alexa Fluor 647-CD31 BioLegend Cat# 102516 RRID: AB_2161029
APC-CD144 BioLegend Cat# 138011, RRID: AB_10679039
PE-CD49d BD Biosciences Cat# 557420 RRID: AB_396693
PE-CD29 eBioscience Cat# 12-0291-81 RRID: AB_657733
APC-CD44 BioLegend Cat# 103012 RRID: AB_312963
FITC-Annexin V BioLegend Cat# 640945 RRID: AB_2629519
Alexa Fluor 488-Ki-67 BioLegend Cat# 151204 RRID: AB_2566800
Biotin-Ki-67 eBioscience Cat# 13-5698-82 RRID: AB_2572794
Mouse anti-Nestin Millipore Cat# MAB353 RRID: AB_94911
Rabbit anti-PTPN21 Abcam Cat# Ab133812 RRID: N/A
Mouse anti-Septin1 Santa Cruz Cat# sc-398586 RRID: N/A
Mouse anti-phosphotyrosine Millipore Cat# 05-321 RRID: AB_309678
Rabbit anti-phospho-Src (Tyr416) Cell Signaling Cat# 2101 RRID: AB_331697
Mouse anti-c-Src Santa Cruz Cat# sc-8056 RRID: AB_627306
Mouse anti-phospho-STAT5A/STAT5B (Tyr694/Tyr699) Millipore Cat# 05-495 RRID: AB_309762
Rabbit anti-STAT5 Santa Cruz Cat# sc-835 RRID: AB_632446
Mouse anti-phospho-ERK Santa Cruz Cat# sc-7383 RRID: AB_627545
Mouse anti-ERK1/2 Santa Cruz Cat# sc-514302 RRID: AB_2571739
Alexa Fluor 488- phalloidin antibody Thermo Fisher Cat# A12379 RRID: AB_2315147
Rhodamine- phalloidin antibody Thermo Fisher Cat# R415 RRID: AB_2572408
Mouse anti-β-actin Santa Cruz Cat# sc-47778 RRID: AB_626632
Bacterial and Virus Strains
pReciever-Lv215 Genecopoeia N/A
pReciever-Lv215-Ptpn21 Generated in this study N/A
pReciever-Lv215- Ptpn21Δ1-307 Generated in this study N/A
pReciever-Lv215- Ptpn21C1110S Generated in this study N/A
pJG-IRES-GFP Emory Integrated
Genomics Core
N/A
pJG-IRES-GFP-Septin1 Generated in this study N/A
pJG-IRES-GFP-Septin1Y246F Generated in this study N/A
Chemicals, Peptides, and Recombinant Proteins
IMDM culture medium Thermo Fisher Cat# 12440053
StemSpan Serum-Free Expansion Medium (SFEM) STEMCELL
Technologies
Cat # 09600
Fetal bovine serum Fisher Scientific Cat# SH3008803IH
Recombinant Murine SCF Pepro Technology Cat# 250-03
Recombinant Murine Flt3-Ligand Pepro Technology Cat# 250-31L
Recombinant Murine TPO Pepro Technology Cat# 315-14
Recombinant Murine IL-3 Pepro Technology Cat# 213-13
Recombinant Murine IL-6 Pepro Technology Cat# 216-16
Recombinant Murine SDF-1α (CXCL12) Pepro Technology Cat# 250-20A
5-Fluorouracil (5-FU) Sigma Cat# F6627
G-CSF(Filgrastim) Kirin-Amgen Inc. N/A
Power SYBR Green PCR Master Mix Thermo Fisher Cat# 4367659
Polybrene (Hexadimethrine bromide) Sigma Cat# 107689-10G
Target Retrieval Solution Agilent Cat# S169984-2
Critical Commercial Assays
Quick-RNA Miniprep Kit Zymo Cat# R1050
SuperScript First-Strand Synthesis System for RT-PCR Invitrogen Cat# 11904018
BD Cytofix/Cytoperm
Fixation/Permeabilization Solution Kit
BD Biosciences Cat# BDB554714
Lineage Cell Depletion Kit, mouse Miltenyi Biotec Cat# 130-090-858
Lenti-Pac HIV Expression Packaging Kit Genecopoeia Cat# LT001
Experimental Models: Cell Lines
HEK293T Cheng-Kui Qu Lab N/A
Experimental Models: Organisms/Strains
Mouse: Ptpn21−/− mice Generated in this study N/A
Oligonucleotides used for qRT-PCR
Forward primer for mouse Ptpn21 cDNA: 5’-TCTTTGGAGACTCGGTTGCT -3’ Synthesized in this study N/A
Reverse primer for mouse Ptpn21 cDNA: 5’-CAGTGGCATCTTCTCCCTTC -3’ Synthesized in this study N/A
Forward primer for mouse Selplg-1 cDNA: 5’-GAAAGGGCTGATTGTGACCCC -3’ Synthesized in this study N/A
Reverse primer for mouse Selplg-1 cDNA: 5’-AGTAGTTCCGCACTGGGTACA -3’ Synthesized in this study N/A
Forward primer for mouse Esl-1 cDNA: 5’-CAAGATGACGGCCATCA -3’ Synthesized in this study N/A
Reverse primer for mouse Esl-1 cDNA: 5’-TTCCCAAGACGAATGCTGC -3’ Synthesized in this study N/A
Forward primer for mouse β-actin cDNA: 5’-AGAGGGAAATCGTGCGTGAC -3’ Synthesized in this study N/A
Reverse primer for mouse β-actin cDNA: 5’-CAATAGTGATGACCTGGCCGT -3’ Synthesized in this study N/A
Software and Algorithms
Flowjo v10.1 https://www.flowjo.com/ N/A
ImageJ v1.51 s https://imagej.nih.gov/ij/ N/A
Prism version 6 Prism Graphpad N/A