Table 1.
Gene density, No. of PGRS, ω ratios range, mean ω ratio, and median ω ratio in poplar and willow genome
Chromosome | P. trichocarpa | S. suchowensis | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|
Genes/Mb | No. of PGRS | PGRS/Mb | ω ratios range | Mean ω ratio | Median ω ratio | Genes/Mb | No. of PGRS | PGRS/Mb | ω ratios range | Mean ω ratio | Median ω ratio | |
I | 93.7 | 2066 | 40.9 | 0.000–2.493 | 0.312 | 0.278 | 100.4 | 1000 | 38.0 | 0.000–0.904 | 0.273 | 0.253 |
II | 104.5 | 1382 | 54.7 | 0.000–2.020 | 0.312 | 0.282 | 113.5 | 822 | 50.6 | 0.000–1.398 | 0.275 | 0.250 |
III | 102.7 | 1122 | 51.4 | 0.000–2.493 | 0.311 | 0.273 | 114.2 | 710 | 58.0 | 0.000–1.177 | 0.281 | 0.255 |
IV | 97.7 | 1020 | 42.0 | 0.000–2.114 | 0.303 | 0.275 | 106.0 | 605 | 45.1 | 0.009–0.943 | 0.261 | 0.249 |
V | 100.6 | 1302 | 50.3 | 0.000–1.705 | 0.305 | 0.276 | 113.6 | 768 | 55.2 | 0.000–1.123 | 0.282 | 0.254 |
VI | 100.8 | 1305 | 46.8 | 0.000–1.228 | 0.305 | 0.276 | 114.0 | 741 | 44.9 | 0.000–0.863 | 0.270 | 0.253 |
VII | 94.4 | 635 | 40.7 | 0.000–1.282 | 0.304 | 0.272 | 103.8 | 314 | 38.1 | 0.000–0.859 | 0.279 | 0.252 |
VIII | 116.4 | 1289 | 66.2 | 0.000–1.702 | 0.311 | 0.277 | 119.9 | 775 | 64.4 | 0.000–0.953 | 0.276 | 0.253 |
IX | 131.8 | 892 | 68.9 | 0.000–2.114 | 0.304 | 0.274 | 122.4 | 518 | 54.0 | 0.000–0.943 | 0.263 | 0.251 |
X | 113.2 | 1289 | 57.1 | 0.000–1.702 | 0.311 | 0.277 | 121.7 | 775 | 54.7 | 0.000–0.953 | 0.276 | 0.253 |
XI | 91.9 | 700 | 37.8 | 0.008–1.779 | 0.315 | 0.279 | 91.2 | 357 | 32.2 | 0.008–0.904 | 0.276 | 0.248 |
XII | 92.5 | 669 | 42.4 | 0.000–1.054 | 0.304 | 0.276 | 94.0 | 279 | 38.3 | 0.000–0.733 | 0.272 | 0.247 |
XIII | 99.1 | 614 | 37.6 | 0.000–1.569 | 0.313 | 0.281 | 98.7 | 338 | 31.4 | 0.022–0.798 | 0.277 | 0.248 |
XIV | 104.9 | 774 | 40.9 | 0.000–2.020 | 0.312 | 0.281 | 119.4 | 419 | 39.7 | 0.000–1.398 | 0.267 | 0.248 |
XV | 97.2 | 656 | 42.9 | 0.000–1.054 | 0.301 | 0.274 | 110.8 | 386 | 44.4 | 0.000–0.763 | 0.267 | 0.239 |
XVI | 99.5 | 677 | 46.7 | 0.000–1.228 | 0.304 | 0.277 | 121.4 | 710 | 53.7 | 0.000–1.177 | 0.281 | 0.255 |
XVII | 96.6 | 530 | 33.0 | 0.013–1.353 | 0.318 | 0.292 | 98.5 | 270 | 31.6 | 0.009–0.749 | 0.268 | 0.249 |
XVIII | 90.0 | 641 | 37.8 | 0.000–1.216 | 0.308 | 0.276 | 97.7 | 312 | 38.2 | 0.013–0.734 | 0.278 | 0.252 |
XIX | 84.1 | 395 | 24.8 | 0.010–1.271 | 0.318 | 0.288 | 89.4 | 223 | 27.1 | 0.022–0.798 | 0.265 | 0.242 |
SDR | 85.3 | 26 | 11.9 | 0.010–1.271 | 0.317 | 0.233 | 79.7 | 11 | 14.9 | 0.092–0.396 | 0.237 | 0.223 |
Genome wide | 100.2 | 8991 | 22.8 | 0.000–2.493 | 0.309 | 0.277 | 108.8 | 5161 | 22.5 | 0.000–1.398 | 0.274 | 0.252 |