Table 2:
Class | No. of copies | Length (bp) | Coverage of genome (%) |
---|---|---|---|
SINE | 27,308 | 7,085,803 | 2.17 |
LINE | 6,688 | 1,596,259 | 0.49 |
Long terminal repeat | 3,445 | 896,470 | 0.28 |
DNA transposon | 53,797 | 9,499,710 | 2.91 |
MITE | 64,663 | 14,240,430 | 4.37 |
Unclassified | 49,627 | 18,375,079 | 5.64 |
Other* | 375,149 | 17,360,944 | 5.33 |
Total | 580,677 | 69,054,695 | 21.18 |
*Other includes microsatellites, simple repeats, and low-complexity sequences.