Table 2.
Prevalence of E. coli virulence genes among the eight most prevalent serotypes of the stx2f-carrying E. coli isolates
| Gene | O63:H6 | O113:H6 | O125:H6 | O132:H34 | O145:H34 | O4:H2 | O45:H2 | O128:H2 |
|---|---|---|---|---|---|---|---|---|
| astA | 77/80 | 24/25 | 24/28 | 4/7 | 12/19 | 4/4 | 15/15 | 13/13 |
| bfpA | 77/80 | 24/28 | 4/7 | 12/19 | 4/4 | 13/15 | 13/13 | |
| cba | 4/4 | 13/15 | 10/13 | |||||
| cdt-I | 80/80 | 25/25 | 28/28 | 7/7 | 19/19 | 4/4 | 15/15 | 9/13 |
| celB | 2/80 | |||||||
| cif | 80/80 | 25/25 | 28/28 | 3/4 | 15/15 | 13/13 | ||
| cma | 4/4 | 14/15 | 10/13 | |||||
| eae | 80/80 | 25/25 | 28/28 | 7/7 | 19/19 | 4/4 | 14/15 | 12/13 |
| -subtype | alpha2 | beta2 | alpha2 | alpha2 | iota1 | beta1 | beta1&iota1 | beta1 |
| ehly1 | 6/7 | |||||||
| espA | 80/80 | 25/25 | 28/28 | 7/7 | 19/19 | 4/4 | 14/15 | 12/13 |
| espB | 80/80 | 25/25 | 28/28 | 7/7 | 19/19 | 4/4 | 14/15 | 12/13 |
| espC | 77/80 | 28/28 | 7/7 | 18/19 | ||||
| espF | 80/80 | 27/28 | 7/7 | 19/19 | 4/4 | 14/15 | 12/13 | |
| espJ | 80/80 | 25/25 | 28/28 | |||||
| fyuA | 25/25 | |||||||
| irp1 | 25/25 | |||||||
| irp2 | 25/25 | |||||||
| irp3 | 25/25 | |||||||
| irp4 | 25/25 | |||||||
| iss | 1/80 | 4/4 | 15/15 | 13/13 | ||||
| nleA | 3/4 | 15/15 | 13/13 | |||||
| nleB | 2/80 | 27/28 | 7/7 | 19/19 | 4/4 | 14/15 | 13/13 | |
| nleC | 72/80 | 1/7 | 4/4 | 15/15 | 13/13 | |||
| stx 2f | 80/80 | 25/25 | 28/28 | 7/7 | 19/19 | 4/4 | 15/15 | 13/13 |
| tccP | 4/80 | 2/7 | ||||||
| tir | 76/80 | 25/25 | 28/28 | 4/7 | 19/19 | 4/4 | 14/15 | 12/13 |
| -subtype | gamma1 | alpha1 | gamma1 | gamma1 | alpha1 | beta1 | beta1 | beta1 |
| vat | 24/25 |