Table 2.
Functional annotation of the most significantly expansive and contract gene families in C. himalaica
| Gene families | KEGG terms | Input no. | Background no. | P value |
| Expanded gene | Ubiquitin-mediated proteolysis | 19 | 137 | 5.59E-29 |
| families | Mismatch repair | 10 | 80 | 9.44E-12 |
| Homologous recombination | 10 | 105 | 9.12E-11 | |
| DNA replication | 10 | 103 | 9.12E-11 | |
| Nucleotide excision repair | 10 | 137 | 9.31E-10 | |
| RNA polymerase | 4 | 32 | 1.59E-06 | |
| Pyrimidine metabolism | 4 | 105 | 9.53E-05 | |
| Purine metabolism | 4 | 176 | 5.66E-04 | |
| Contracted gene | NF-κB signaling pathway | 64 | 93 | 1.96E-106 |
| families | Toll-like receptor signaling pathway | 64 | 106 | 5.32E-104 |
| Retinol metabolism | 21 | 65 | 3.60E-29 | |
| Metabolism of xenobiotics by P450 | 18 | 73 | 2.89E-23 | |
| Tryptophan metabolism | 13 | 40 | 2.89E-18 | |
| Steroid hormone biosynthesis | 13 | 58 | 1.73E-16 | |
| Metabolic pathways | 31 | 1,243 | 1.03E-12 | |
| Arachidonic acid metabolism | 10 | 62 | 1.35E-11 | |
| Linoleic acid metabolism | 8 | 29 | 4.96E-11 | |
| Lysosome | 7 | 123 | 1.27E-05 | |
| Apoptosis | 4 | 33 | 9.75E-05 |