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. 2019 Apr 8;2:115. doi: 10.1038/s42003-019-0339-0

Table 1.

Sentinel SNPs associated with SUA in Japanese as identified in the meta-analysis

SNP Locus Chr Position Gene Alleles EAF Betaa ± SE P value I 2
Effect Noneffect
Novel loci
rs74896528 1p35.3 1 28598287 SESN2 T C 0.057 −0.057 ± 0.010 8.42 × 10−9 0
rs10188118 2p25.3 2 653623 LOC105373352, TMEM18 C G 0.864 0.035 ± 0.006 8.60 × 10−9 48.7
rs6774054 3q25.1 3 149211699 TM4SF4 A G 0.337 0.024 ± 0.004 1.58 × 10−8 0
rs11952102 5q35.3 5 176740704 MXD3, LMAN2 A G 0.448 0.022 ± 0.004 4.24 × 10−8 0
rs16898823 6p21.33 6 31106606 PSORS1C1, PSORS1C2 A T 0.900 0.037 ± 0.007 2.55 × 10−8 0
rs8024067 15q26.1 15 93439224 LINC01578 T G 0.158 −0.034 ± 0.006 8.41 × 10−9 40.9
rs6031598 20q13.12 20 43056149 HNF4A T G 0.378 −0.023 ± 0.004 2.90 × 10−8 27.5
rs2281293 22q13.31 22 44334842 PNPLA3 T C 0.559 0.024 ± 0.004 4.99 × 10−9 0
Loci also identified by BBJ 28
rs811372 2p15 2 61429568 USP34 T C 0.367 0.026 ± 0.004 7.97 × 10−10 4
rs10857147 4q21.21 4 81181072 PRDM8, FGF5 A T 0.699 0.032 ± 0.005 1.31 × 10−11 17.2
rs13230625 7p22.3 7 1286244 UNCX, MICALL2 A G 0.318 0.027 ± 0.004 4.82 × 10−10 0
rs7835379 8q22.1 8 95975080 TP53INP1, NDUFAF6 A G 0.755 0.032 ± 0.005 7.41 × 10−12 46.6
rs9416703 10q21.1 10 60283008 BICC1 A C 0.525 −0.036 ± 0.004 1.70 × 10−18 0
rs11202346 10q23.2 10 88908912 FAM35A T G 0.225 0.035 ± 0.005 4.12 × 10−12 0
rs1886603 10q26.11 10 119482303 EMX2, RAB11FIP2 A G 0.374 0.027 ± 0.004 3.22 × 10−11 0
rs2220970 11p15.4 11 9857749 SBF2 A G 0.342 0.024 ± 0.004 1.12 × 10−8 0
rs963837 11p14.1 11 30749090 MPPED2, DCDC1 T C 0.656 0.028 ± 0.005 8.41 × 10−10 5.6
rs6026578 20q13.32 20 57463472 LOC101927932 C G 0.278 0.028 ± 0.005 5.48 × 10−10 0
Loci also identified by other studies
rs1797052 1q21.1 1 145727683 PDZK1 T C 0.185 0.041 ± 0.005 2.57 × 10−15 0
rs4072037 1q22 1 155162067 MUC1 T C 0.828 −0.048 ± 0.005 6.93 × 10−20 62.7
rs1260326 2p23.3 2 27730940 GCKR T C 0.559 0.036 ± 0.004 7.56 × 10−19 0
rs16856823 2q31.1 2 170200452 LRP2 A T 0.808 −0.039 ± 0.005 6.61 × 10−14 0
rs6445559 3p21.1 3 53099466 SFMBT1, RFT1 A G 0.561 0.029 ± 0.004 2.53 × 10−12 2.6
rs7679724 4p16.1 4 9985376 SLC2A9 T G 0.586 0.130 ± 0.004 1.67 × 10−224 81.6
rs4148155 4q22.1 4 89054667 ABCG2 A G 0.705 −0.115 ± 0.004 2.05 × 10−149 0
rs2762353 6p22.2 6 25794431 SLC17A1 A G 0.160 −0.054 ± 0.005 8.68 × 10−24 11.5
rs9394948 6p21.1 6 43334755 ZNF318 A C 0.341 0.032 ± 0.004 1.65 × 10−13 9
rs17145750 7q11.23 7 73026378 MLXIPL T C 0.102 −0.038 ± 0.007 5.85 × 10−9 0
rs1828911 8q21.11 8 76462547 HNF4G T C 0.575 −0.038 ± 0.004 8.08 × 10−21 0
rs57633992 11q13.1 11 64424967 NRXN2 A C 0.054 −0.668 ± 0.010 <1 × 10−300 68.8
rs79105258 12q24.12 12 111718231 CUX2 A C 0.254 −0.078 ± 0.005 1.91 × 10−56 0
rs73436803 15q24.2 15 75619201 GOLGA6D, COMMD4 T C 0.099 −0.043 ± 0.008 1.38 × 10−8 0
rs4966024 15q26.3 15 99295570 IGF1R A G 0.486 −0.033 ± 0.004 4.43 × 10−16 0
rs244423 16q22.1 16 69610002 NFAT5 A G 0.156 0.035 ± 0.006 2.00 × 10−10 40.5
rs73575095 16q23.2 16 79750332 MAF, MAFTRR T C 0.719 0.035 ± 0.005 4.03 × 10−15 0
rs9895661 17q23.2 17 59456589 BCAS3 T C 0.475 0.044 ± 0.005 9.20 × 10−23 0

Chr chromosome, SUA serum uric acid

aThe beta value represents change in z-score per effect allele copy for the SNP