Table 2.
Overview of all variation data containing INDELs/SNPs generated analyzing the 16 resequenced EMS induced mutant lines.
| INDEL/SNP type | EMS-1 | EMS-2 | EMS-3 | EMS-4 | EMS-5 | EMS-6 | EMS-7 | EMS-8 | EMS-9 | EMS-10 | EMS-11 | EMS-12 | EMS-13 | EMS-14 | EMS-15 | EMS-16 | Average |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| INTERGENIC | 932 | 1045 | 1029 | 980 | 1321 | 981 | 1054 | 963 | 1202 | 995 | 1012 | 1149 | 954 | 1149 | 911 | 1133 | 1050.63 |
| UPSTREAM | 416 | 416 | 446 | 436 | 739 | 438 | 451 | 410 | 554 | 386 | 426 | 482 | 416 | 489 | 367 | 547 | 463.69 |
| DOWNSTREAM | 367 | 361 | 380 | 352 | 519 | 351 | 355 | 367 | 438 | 380 | 336 | 391 | 352 | 388 | 319 | 411 | 379.19 |
| UTR_5_PRIME | 26 | 24 | 23 | 32 | 60 | 27 | 28 | 20 | 43 | 21 | 27 | 20 | 30 | 23 | 17 | 34 | 28.44 |
| UTR_3_PRIME | 12 | 14 | 13 | 14 | 17 | 15 | 14 | 14 | 18 | 7 | 12 | 16 | 12 | 16 | 10 | 17 | 13.81 |
| INTRON | 205 | 233 | 227 | 221 | 292 | 213 | 204 | 212 | 243 | 204 | 204 | 213 | 214 | 232 | 175 | 216 | 219.25 |
| STOP_GAINED | 1 | 1 | 1 | 1 | 0 | 1 | 0 | 0 | 1 | 1 | 0 | 1 | 1 | 1 | 1 | 2 | 0.81 |
| SPLICE_VARIATION | 21 | 19 | 29 | 22 | 26 | 28 | 22 | 21 | 22 | 22 | 21 | 28 | 26 | 22 | 22 | 6 | 22.31 |
| FRAME_SHIFT | 20 | 18 | 28 | 21 | 25 | 26 | 22 | 20 | 21 | 20 | 21 | 26 | 24 | 21 | 20 | 29 | 22.63 |
| CODON_INSERTION/DELETION | 22 | 20 | 30 | 23 | 25 | 28 | 22 | 20 | 23 | 22 | 21 | 28 | 26 | 23 | 22 | 6 | 22.56 |
| SYNONYMOUS_CODING | 33 | 25 | 37 | 25 | 66 | 39 | 41 | 28 | 46 | 26 | 39 | 34 | 43 | 31 | 39 | 57 | 38.06 |
| NON_SYNONYMOUS_CODING | 29 | 31 | 29 | 29 | 60 | 24 | 30 | 18 | 49 | 32 | 29 | 36 | 28 | 30 | 38 | 53 | 34.06 |
| SUM | 2084 | 2207 | 2272 | 2156 | 3150 | 2171 | 2243 | 2093 | 2660 | 2116 | 2148 | 2424 | 2126 | 2425 | 1941 | 2511 | 2295.44 |