Table 2.
Haplotype Diversity within Dogs and North American Wolves, for Each of Four Types of Region within the Genome.a
| Region Type | Group | π | θw | Tajima's D |
|---|---|---|---|---|
| K locus Core | Dog KB | 0.00117 (0.00105) | 0.00115 (0.00096) | 0.02901 (0.91231) |
| Dog ky | 0.002 (0.0013) | 0.00174 (0.00095) | 0.51471 (1.32856) | |
| Wolf KB | 0.00035 (0.00045) | 0.00093 (0.00068) | −1.30547 (0.59812) | |
| Alaska | 0.00035 (0.00085) | 0.00039 (0.0009) | −0.50833 (1.22007) | |
| NWT | 0.00094 (0.00142) | 0.00066 (0.00097) | 1.64671 (0.82527) | |
| YNP | 0.00011 (0.0003) | 0.0003 (0.00047) | −1.13885 (0.86024) | |
| Yukon | 0.00119 (0.0015) | 0.00119 (0.0015) | NA | |
| Wolf ky | 0.00216 (0.00121) | 0.0017 (0.00076) | 0.60353 (1.00967) | |
| Alaska | 0.00235 (0.00135) | 0.00188 (0.0009) | 0.62744 (0.99614) | |
| NWT | 0.0022 (0.0012) | 0.00197 (0.00098) | 0.32539 (0.82504) | |
| YNP | 0.00187 (0.00121) | 0.00132 (0.00066) | 0.85937 (1.1648) | |
| Yukon | 0.00166 (0.00128) | 0.0016 (0.00112) | 0.06557 (1.0714) | |
| Nontelomeric | Dogs | 0.0009 (0.00085) | 0.00082 (0.00064) | 0.15874 (1.11635) |
| Wolves | 0.00131 (0.00093) | 0.00108 (0.00053) | 0.33245 (0.99481) | |
| Telomeric | Dogs | 0.00139 (0.00099) | 0.00132 (0.00078) | 0.1472 (0.97505) |
| Wolves | 0.00166 (0.00096) | 0.00144 (0.00065) | 0.30451 (0.92183) | |
| Alaska | 0.0016 (0.00104) | 0.00139 (0.00075) | 0.35304 (0.98058) | |
| NWT | 0.00182 (0.00112) | 0.0016 (0.00082) | 0.29791 (0.85435) | |
| YNP | 0.0015 (0.00091) | 0.00095 (0.00051) | 1.06465 (1.05498) | |
| Yukon | 0.00166 (0.0011) | 0.00174 (0.00104) | −0.22621 (0.73964) | |
| Neutral | Dogs | 0.00111 (0.00039) | 0.00101 (0.00031) | 0.30352 (0.62597) |
| Wolves | 0.00146 (0.00041) | 0.00117 (0.00027) | 0.70033 (0.57855) |
Note.—Italics text indicates values for the K locus region that are significantly different from Telomeric regions (P < 0.05 with Wilcoxon rank sum test). See supplementary table S5, Supplementary Material online for P values. Θw, Watterson's theta; π, nucleotide diversity.
a
Summary statistics were calculated from 1 kb nonoverlapping windows (K locus Core: 103, Nontelomeric: 96, Telomeric: 75) or 10 kb nonoverlapping windows (Neutral: 491), and the mean and standard deviation are provided.