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. 2019 Apr 9;14(4):e0211756. doi: 10.1371/journal.pone.0211756

Fig 5. Structural modeling of aptamers and the PfR6–HMG-box Pf complex.

Fig 5

(A) Tertiary structure prediction of the PfR6 aptamer. (B) Alternative models for the PfR6–HMG-box Pf complex as evaluated by ZDOCK [34]. The degree of opacity is proportional to the ZDOCK Score (10% opacity corresponding to a score of 1350, maximum opacity corresponds to a score of 1850) (S6 Fig). (C) as B for the PfR6–HMG-box Hs. The PfR6 aptamer is depicted in sky blue, the HMG-box Pf in pale green, and HMG-box Hs in pink.