TABLE 1.
Bacterial strains
| Strain | Genotype | Source or reference(s) |
|---|---|---|
| V. fischeri | ||
| MJM1059 | MJ11 | 25, 53 |
| MJM1100 | ES114 | 54 |
| MJM1104 | ES114 (MJM1100)/pKV69 | This study |
| MJM1106 | ES114 (MJM1100)/pKG11 | This study |
| MJM1109 | MJ11 (MJM1059)/pKV69 | This study |
| MJM1111 | MJ11 (MJM1059)/pKG11 | This study |
| MJM1114 | MJ12 | 53 |
| MJM1115 | CG101 | 25 |
| MJM1117 | ES213 | 55 |
| MJM1119 | EM18 | 25, 53 |
| MJM1120 | EM24 | 53, 56 |
| MJM1121 | EM30 | 53 |
| MJM1122 | WH1 | 57 |
| MJM1125 | SR5 | 24 |
| MJM1126 | SA1 | 24 |
| MJM1127 | KB1A97 | 29 |
| MJM1128 | KB2B1 | 29 |
| MJM1129 | KB5A1 | 29 |
| MJM1130 | MB11B1 | 29 |
| MJM1136 | EM17 | 56 |
| MJM1147 | mjapo.6.1 | 22 |
| MJM1149 | mjapo.7.1 | 22 |
| MJM1151 | mjapo.8.1 | 22 |
| MJM1153 | mjapo.9.1 | 22 |
| MJM1219 | mjapo.8.1/pKV69 | This study |
| MJM1221 | mjapo.8.1/pKG11 | This study |
| MJM1238 | MJ12 (MJM1114)/pKV69 | This study |
| MJM1239 | MJ12 (MJM1114)/pKG11 | This study |
| MJM1240 | SR5 (MJM1125)/pKV69 | This study |
| MJM1241 | SR5 (MJM1125)/pKG11 | This study |
| MJM1242 | SA1 (MJM1126)/pKV69 | This study |
| MJM1243 | SA1 (MJM1126)/pKG11 | This study |
| MJM1244 | MB11B1 (MJM1130)/pKV69 | This study |
| MJM1245 | MB11B1 (MJM1130)/pKG11 | This study |
| MJM1246 | EM17 (MJM1136)/pKV69 | This study |
| MJM1247 | EM17 (MJM1136)/pKG11 | This study |
| MJM1254 | KB1A97 (MJM1127)/pKV69 | This study |
| MJM1255 | KB1A97 (MJM1127)/pKG11 | This study |
| MJM1256 | KB2B1 (MJM1128)/pKV69 | This study |
| MJM1257 | KB2B1 (MJM1128)/pKG11 | This study |
| MJM1258 | KB5A1 (MJM1129)/pKV69 | This study |
| MJM1259 | KB5A1 (MJM1129)/pKG11 | This study |
| MJM1260 | ES213 (MJM1117)/pKV69 | This study |
| MJM1261 | ES213 (MJM1117)/pKG11 | This study |
| MJM1266 | EM18 (MJM1119)/pKV69 | This study |
| MJM1267 | EM18 (MJM1119)/pKG11 | This study |
| MJM1268 | EM24 (MJM1120)/pKV69 | This study |
| MJM1269 | EM24 (MJM1120)/pKG11 | This study |
| MJM1270 | EM30 (MJM1121)/pKV69 | This study |
| MJM1271 | EM30 (MJM1121)/pKG11 | This study |
| MJM1272 | mjapo.6.1 (MJM1147)/pKV69 | This study |
| MJM1273 | mjapo.6.1 (MJM1147)/pKG11 | This study |
| MJM1274 | mjapo.7.1 (MJM1149)/pKV69 | This study |
| MJM1275 | mjapo.7.1 (MJM1149)/pKG11 | This study |
| MJM1276 | mjapo.9.1 (MJM1151)/pKV69 | This study |
| MJM1277 | mjapo.9.1 (MJM1151)/pKG11 | This study |
| MJM1278 | CG101 (MJM1115)/pKV69 | This study |
| MJM1279 | CG101 (MJM1115)/pKG11 | This study |
| MJM1280 | WH1 (MJM1122)/pKV69 | This study |
| MJM1281 | WH1 (MJM1122)/pKG11 | This study |
| MJM1782 | ES114 (MJM1100) pVSV104 | 18 |
| MJM2114 | MB15A4 | 29 |
| MJM2226 | ES114 (MJM1100)/pMJM33 | This study |
| MJM2251 | ES114 (MJM1100) ΔbinK | 18 |
| MJM2386 | ES114 (MJM1100)/pBinK | This study |
| MJM2997 | MB11B1 (MJM1130)/pVSV104 | This study |
| MJM2998 | MB11B1 (MJM1130)/pBinK | This study |
| MJM2999 | ES213 (MJM1117)/pVSV104 | This study |
| MJM3000 | ES213 (MJM1117)/pBinK | This study |
| MJM3010 | ES114 (MJM1100) ΔrscS | This study |
| MJM3017 | ES213 (MJM1117) ΔrscS | This study |
| MJM3042 | MB15A4 (MJM2114) ΔrscS | This study |
| MJM3046 | MB11B1 (MJM1130) ΔrscS | This study |
| MJM3062 | ES114 (MJM1100) Δsyp | This study |
| MJM3065 | MB11B1 (MJM1130) Δsyp | This study |
| MJM3068 | ES213 (MJM1117) Δsyp | This study |
| MJM3071 | MB15A4 (MJM2114) Δsyp | This study |
| MJM3084 | MB11B1 (MJM1130) ΔbinK | This study |
| MJM3354 | ES114 (MJM1100) sypE(ntG33Δ) | This study |
| MJM3364 | ES114 (MJM1100) sypE(ntG33Δ)/pKV69 | This study |
| MJM3365 | ES114 (MJM1100) sypE(ntG33Δ)/pEAH73 | This study |
| MJM3370 | MB11B1 (MJM1130)/pKV69 | This study |
| MJM3371 | MB11B1 (MJM1130)/pEAH73 | This study |
| MJM3394 | ES114 (MJM1100) ΔrscS sypE(ntG33Δ) | This study |
| MJM3397 | MB11B1 (MJM1130) sypE(nt33::G) | This study |
| MJM3398 | MB11B1 (MJM1130) sypE(nt33::G)/pKV69 | This study |
| MJM3399 | MB11B1 (MJM1130) sypE(nt33::G)/pEAH73 | This study |
| MJM3410 | MB11B1 (MJM1130) ΔsypE | This study |
| MJM3411 | MB11B1 (MJM1130) ΔsypE/pKV69 | This study |
| MJM3412 | MB11B1 (MJM1130) ΔsypE/pEAH73 | This study |
| MJM3417 | ES114 (MJM1100) ΔsypE | This study |
| MJM3418 | ES114 (MJM1100) ΔsypE/pKV69 | This study |
| MJM3419 | ES114 (MJM1100) ΔsypE/pEAH73 | This study |
| MJM3423 | ES114 (MJM1100) ΔrscS ΔsypE | This study |
| MJM3455 | ES114 (MJM1100)/pEAH73 | This study |
| MJM3501 | SR5 (MJM1125) Δsyp | This study |
| MJM3751 | SR5 (MJM1125) ΔbinK::erm | This study |
| E. coli | ||
| MJM534 | CC118 λpir/pEVS104 | 58 |
| MJM537 | DH5α λpir | Laboratory stock |
| MJM570 | DH5α/pEVS79 | 58 |
| MJM580 | DH5α λpir/pVSV104 | 59 |
| MJM581 | DH5α/pKV69 | 60 |
| MJM583 | DH5α/pKG11 | 15 |
| MJM639 | XL1-Blue/pMJM33 | This study |
| MJM658 | BW23474/pEVS107 | 61 |
| MJM2384 | DH5α λpir/pBinK | 18 |
| MJM2540 | KV5264/pEAH73 | 39 |
| MJM3008 | DH5α/pEVS79-ΔrscS[MJM1100] | This study |
| MJM3014 | DH5α λpir/pEVS79-ΔrscS[MJM1117] | This study |
| MJM3039 | DH5α λpir/pEVS79-ΔrscS[MJM2114] | This study |
| MJM3043 | DH5α λpir/pEVS79-ΔrscS[MJM1130] | This study |
| MJM3060 | NEB5α/pEVS79-Δsyp[MJM1100] | This study |
| MJM3063 | NEB5α/pEVS79-Δsyp[MJM1130] | This study |
| MJM3066 | DH5α λpir/pEVS79-Δsyp[MJM1117] | This study |
| MJM3069 | DH5α λpir/pEVS79-Δsyp[MJM2114] | This study |
| MJM3082 | NEB5α/pEVS79-ΔbinK[MJM1130] | This study |
| MJM3287 | NEB5α/pHB1 | This study |
| MJM3338 | DH5α λpir/pEVS107-sypE[MJM1130](nt33::G) | This study |
| MJM3340 | DH5α λpir/pEVS107-sypE[MJM1100](ntG33Δ) | This study |
| MJM3351 | NEB5α/pEVS79-sypE[MJM1130](nt33::G) | This study |
| MJM3352 | NEB5α/pEVS79-sypE[MJM1100](ntG33Δ) | This study |
| MJM3409 | NEB5α/pEVS79-ΔsypE[MJM1130] | This study |
| MJM3416 | NEB5α/pEVS79-ΔsypE[MJM1100] | This study |