Table 7. Molecular geometry (Å, °) of N9-substituted isoguanine.
REFMAC | CSD | QM for iG | QM for iCiG† | |
---|---|---|---|---|
N1—C2 | 1.337 | - | 1.457 | 1.419 |
C2—N3 | 1.350 | - | 1.357 | 1.351 |
N3—C4 | 1.355 | - | 1.318 | 1.334 |
C4—C5 | 1.490 | - | 1.409 | 1.407 |
C5—C6 | 1.490 | - | 1.382 | 1.401 |
C6—N1 | 1.337 | - | 1.351 | 1.361 |
C5—N7 | 1.350 | - | 1.386 | 1.388 |
N7—C8 | 1.350 | - | 1.302 | 1.312 |
C8—N9 | 1.337 | - | 1.387 | 1.390 |
N9—C4 | 1.337 | - | 1.376 | 1.378 |
C6—N6 | 1.355 | - | 1.346 | 1.337 |
C2—O2 | 1.250 | - | 1.216 | 1.254 |
C6—N1—C2 | 120.0 | - | 126.42 | 126.0 |
N1—C2—N3 | 120.0 | - | 116.91 | 119.6 |
C2—N3—C4 | 120.0 | - | 115.56 | 114.1 |
N3—C4—C5 | 120.0 | - | 129.33 | 129.3 |
C4—C5—C6 | 120.0 | - | 116.86 | 116.5 |
C5—C6—N1 | 120.0 | - | 114.91 | 114.5 |
N3—C4—N9 | 132.0 | - | 126.59 | 126.3 |
C6—C5—N7 | 132.0 | - | 131.66 | 132.0 |
C5—C4—N9 | 108.0 | - | 104.08 | 104.4 |
C4—N9—C8 | 108.0 | - | 106.76 | 106.7 |
N9—C8—N7 | 108.0 | - | 113.64 | 113.4 |
C8—N7—C5 | 108.0 | - | 104.05 | 104.1 |
N7—C5—C4 | 108.0 | - | 111.48 | 111.4 |
N6—C6—N1 | 120.0 | - | 121.19 | 119.8 |
N6—C6—C5 | 120.0 | - | 123.91 | 125.7 |
O2—C2—N1 | 120.0 | - | 115.85 | 116.6 |
O2—C2—N3 | 120.0 | - | 127.24 | 123.8 |
RMSD versus QM for iG (d/a) | 0.0179/1.272 |
Suggested standard deviations 0.008 Å for bonds, 0.6° for angles.