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. 2019 Apr 10;9:5865. doi: 10.1038/s41598-019-41883-x

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© The Author(s) 2019

Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/.

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BLAST atlas comparing the genomes used in this study and MO10 to the N16961 reference genome. The presence of VPI-1, VSP-1, and VSP-2 in the three toxigenic V. cholerae O139 assemblies, as well as the truncation of VPI-2, is indicated. The non-toxigenic strain did not harbour VSP-1, VSP-2, or VPI-2 (indicated), although a region homologous to part of VPI-1 (VC_0809 to VC_0816) was detected on the larger chromosome. The sequences of both V. cholerae chromosomes were concatenated to generate this figure; the boundary between the chromosomes is denoted.