Table 1.
Sequences | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | 10 | 11 | |
---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | DENV2_IS1473_Seychelles_C1_2017 | 0,0000 | 0,0000 | 0,0000 | 0,0018 | 0,0023 | 0,0029 | 0,0031 | 0,0062 | 0,0062 | 0,0079 | |
2 | DENV2_IS1517_Seychelles_C1_2017 | 0,0000 | 0,0000 | 0,0000 | 0,0018 | 0,0023 | 0,0029 | 0,0031 | 0,0062 | 0,0062 | 0,0079 | |
3 | DENV2_IS1754155D_Seychelles_C1_2017 | 0,0000 | 0,0000 | 0,0000 | 0,0018 | 0,0023 | 0,0029 | 0,0031 | 0,0062 | 0,0062 | 0,0079 | |
4 | DENV2_ISIcilov_Seychelles_C1_2017 | 0,0000 | 0,0000 | 0,0000 | 0,0018 | 0,0023 | 0,0029 | 0,0031 | 0,0062 | 0,0062 | 0,0079 | |
5 | DENV2_MK570306_Jul_Run_C1_2018 | 0,0033 | 0,0033 | 0,0033 | 0,0033 | 0,0019 | 0,0033 | 0,0035 | 0,0062 | 0,0062 | 0,0080 | |
6 | DENV2_MK570307_Tom_Run_C1_2018 | 0,0044 | 0,0044 | 0,0044 | 0,0044 | 0,0033 | 0,0037 | 0,0037 | 0,0061 | 0,0061 | 0,0079 | |
7 | DNV2_JQ955624_India_C1_2011 | 0,0089 | 0,0089 | 0,0089 | 0,0089 | 0,0122 | 0,0133 | 0,0032 | 0,0062 | 0,0063 | 0,0077 | |
8 | DNV2_KF479233_China_India_C1_2013 | 0,0089 | 0,0089 | 0,0089 | 0,0089 | 0,0122 | 0,0133 | 0,0111 | 0,0062 | 0,0063 | 0,0079 | |
9 | DNV2_L10048_Seychelles_C1_1977 | 0,0388 | 0,0388 | 0,0388 | 0,0388 | 0,0421 | 0,0410 | 0,0399 | 0,0388 | 0,0019 | 0,0070 | |
10 | DNV2_L10047_Seychelles_C1_1977 | 0,0410 | 0,0410 | 0,0410 | 0,0410 | 0,0443 | 0,0432 | 0,0421 | 0,0410 | 0,0033 | 0,0071 | |
11 | DNV2_MG189962_Dar_es_Salaam_C2_2014 | 0,0642 | 0,0642 | 0,0642 | 0,0642 | 0,0676 | 0,0664 | 0,0642 | 0,0664 | 0,0554 | 0,0576 |
The number of base differences per site between sequences are shown. Standard error estimate(s) are shown above the diagonal. The rate variation among sites was modeled with a gamma distribution (shape parameter = 0.05). The analysis involved 11 nucleotide sequences. Codon positions included were 1st + 2nd + 3rd. All positions containing gaps and missing data were eliminated. There were a total of 903 positions in the final dataset. Evolutionary analyses were conducted in MEGA X [9].