Table 2.
Sequence identity of the complete genome and individual genes and proteins of dCoV/Q/PL/G032/2015 to other deltacoronavirus strains (in bold-the highest nt and aa identity)
| Genome | RdRp | S | E | M | N | ||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| nt | aa | nt | aa | nt | aa | nt | aa | nt | aa | ||
| Porcine_dCoV_HKU15_strain_HKU15-155_(JQ065043) | 81.7 | 83.9 | 89.9 | 68.1 | 71.6 | 88.9 | 94 | 88.1 | 88.9 | 88.3 | 89.8 |
| Porcine_dCoV_PDCoV/USA/Illinois121/2014_(KJ481931) | 81.7 | 83.9 | 89.9 | 68.2 | 71.5 | 88.5 | 94 | 87.8 | 89.4 | 87.7 | 89.2 |
| Porcine_dCoV_CHN-LYG-2014_(KU665558) | 81.7 | 83.7 | 89.7 | 68 | 71.6 | 89.3 | 94 | 88.4 | 89.4 | 88 | 89.8 |
| Asian leopard cat dCoV Guangxi/F230/2006 (EF584908) | n/a | n/a | n/a | 70.1 | 66.4 | 88.8 | 94 | 88.1 | 89.4 | 87.7 | 89.2 |
| Sparrow_dCoV_HKU17-6124_(JQ065045) | 79.5 | 84.4 | 90.7 | 48.7 | 41.9 | 77.8 | 82.9 | 83.8 | 87.1 | 88.5 | 90.6 |
| Magpie-robin_dCoV_HKU18-chu3_(JQ065046) | 68.1 | 73.2 | 79.2 | 48.9 | 42.4 | 75.8 | 73.2 | 67.3 | 70.2 | 72.7 | 76.9 |
| Munia_dCoV_HKU13-3514_(FJ376622) | 70.1 | 72.4 | 78.2 | 66.6 | 70.2 | 69.8 | 68.3 | 65.4 | 72.9 | 69.1 | 75.4 |
| Bulbul_dCoV_HKU11-796_(FJ376620) | 67.5 | 70.4 | 75 | 63.4 | 65.9 | 69.8 | 74.4 | 68.6 | 71.1 | 70.2 | 71.9 |
| Bulbul_dCoV_HKU11-934_(FJ376619) | 67.5 | 70.3 | 74.9 | 63.5 | 65.5 | 69.8 | 74.4 | 68.3 | 71.6 | 69.9 | 72.2 |
| Thrush_dCoV_HKU12-600_(FJ376621) | 66.4 | 70 | 74.6 | 50.8 | 45.7 | 72.2 | 76.8 | 70.9 | 73.9 | 75.8 | 78.7 |
| White-eye_dCoV_HKU16-6847_(JQ065044) | 66.6 | 69 | 73 | 59.7 | 59.8 | 71.8 | 74.4 | 71.8 | 74.8 | 74.1 | 74.8 |
| Common-moorhen_dCoV_HKU21-8295_(JQ065049) | 61.7 | 65.4 | 68.5 | 53.5 | 49.4 | 63.2 | 63.4 | 52.4 | 14.3 | 61.5 | 59.8 |
| Wigeon_dCoV_HKU20_(NC_016995) | 52.5 | 53.1 | 50 | 48.5 | 40.9 | 47 | 36.3 | 57.1 | 53.2 | 52.4 | 50.1 |
| Night-heron_dCoV_HKU19_(NC_016994) | 53.4 | 54.1 | 51.3 | 46.7 | 40.4 | 49.2 | 36.1 | 58.4 | 53.2 | 50.5 | 50.9 |
| Quail_dCoV_UAE-HKU30 411F (LC364345) | 92.6 | 93.5 | 96.2 | 85.7 | 85.4 | 93.3 | 98.8 | 91.6 | 93.5 | 94.4 | 97.9 |
| Quail_dCoV_UAE-HKU30 1101F (LC364346) | 92.4 | 93 | 96.5 | 85.6 | 85.5 | 93.7 | 98.8 | 91.4 | 93.5 | 94.7 | 98.8 |
| Pigeon_dCoV_UAE-HKU29 271F (LC364344) | 65 | 69 | 74.1 | 49.4 | 42.2 | 75.8 | 78 | 70.5 | 72.9 | 72 | 73.5 |
| Hubara_dCoV_UAE-HKU28 285F (LC364343) | 65 | 69 | 74.1 | 49.3 | 42.2 | 75.8 | 78 | 70.3 | 72.9 | 72 | 73.5 |
| Falcon_dCoV_UAE-HKU27 988F (LC364342) | 65 | 69 | 74.1 | 49.6 | 42.3 | 76.2 | 78 | 70.9 | 73.4 | 71.4 | 73.2 |