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. 2019 Apr 11;9:5931. doi: 10.1038/s41598-019-42091-3

Table 2.

Results individual set unique burden analysis.

Variant type Phenotype All Cohorts Balanced Cohorts
No. of individuals No. of SNVs ISUB score (mean/median/sd) p value No. of individuals No. of SNVs ISUB score (mean/median/sd) p value
DEL Case 4244 6600 1.58/1.23/1.57 0.21 2489 4201 1.47/1.20/1.62 0.51
Control 3106 3135 1.38/1.13/1.49 2580 4025 1.42/1.21/1.20
NS Case 4244 23,231 4.33/3.49/4.16 9.6 × 10−137 2489 14,831 3.97/3.43/4.55 0.37
Control 3106 11,088 2.30/1.89/2.10 2580 14,310 3.83/3.49/2.82

Results given for analysis comprising all individuals (all cohorts; N = 7350) and for a subset of samples comprising balanced case-control cohorts only (balanced cohorts; samples from The Netherlands, Belgium and Ireland, N = 5069). P values given for logistic regression with first six principal components and country of sample origin included as covariates. DEL = deleterious variants, NS = all nonsynonymous and loss-of-function variants.