Table 1.
The top 20 upregulated DElncRNAs in metastatic melanoma (p < 0.01).
| GenBank Accession | |||||
|---|---|---|---|---|---|
| number | Chromosome/location | Ensembl gene ID | Gene type | log2 Fold Change | FDR |
| LINC01235 | 9p23 | ENSG00000270547 | LincRNA | 2.35954048 | 6.73E-31 |
| LINC00824 | 8q24.21 | ENSG00000254275 | Processed_transcript | 5.538087262 | 7.46E-18 |
| AC243960.1 | 19, CH17-20A21 | ENSG00000268027 | LincRNA | 2.163950636 | 3.65E-17 |
| MEOX2-AS1 | 7p21.2 1q43 | ENSG00000229108 | LincRNA | 3.850613425 | 4.59E-17 |
| CHRM3-AS2 | 1q43 | ENSG00000233355 | Antisense | 3.053111642 | 4.63E-17 |
| LINC00861 | 8q24.13 | ENSG00000245164 | LincRNA | 2.355695169 | 1.76E-16 |
| AL365361.1 | 1, clone RP11-284N8 | ENSG00000259834 | LincRNA | 2.060003316 | 1.92E-16 |
| LINC01624 | 6q27 | ENSG00000227508 | LincRNA | 2.088952578 | 2.18E-16 |
| LINC01215 | 3q13.12 | ENSG00000271856 | LincRNA | 2.792953673 | 1.38E-15 |
| LINC01857 | 2q33.3 | ENSG00000224137 | LincRNA | 2.056385031 | 8.76E-14 |
| AC083967.1 | 8, Clone: RP11-865I6 | ENSG00000254337 | LincRNA | 3.368320439 | 2.92E-13 |
| AC023301.1 | 18,Clone: RP11-713C5 | ENSG00000265579 | Sense_intronic | 3.060224388 | 3.51E-13 |
| LINC01781 | 1p31.1 | ENSG00000234184 | LincRNA | 2.982915086 | 4.19E-13 |
| AC091806.1 | X, clone RP11-320G24 | ENSG00000236393 | LincRNA | 3.035227377 | 1.92E-12 |
| LINC00402 | 13, NR_144451.1 | ENSG00000235532 | LincRNA | 2.710541667 | 3.03E-12 |
| AC106882.1 | 4, clone RP11-768B22 | ENSG00000248571 | Antisense | 2.690704212 | 6.64E-12 |
| AL354719.2 | 6, clone RP11-59D5 | ENSG00000236345 | Antisense | 3.297587187 | 6.73E-12 |
| LINC02422 | 12p11.21 | ENSG00000255760 | LincRNA | 2.195008576 | 1.32E-11 |
| AC133961.1 | UNK, clone RP13-494C23 | ENSG00000251009 | LincRNA | 2.275195921 | 2.17E-11 |
| AC104051.2 | 8, clone CTD-2339F6 | ENSG00000254139 | LincRNA | 4.511208671 | 4.41E-11 |