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. 2019 Apr 12;10:1702. doi: 10.1038/s41467-019-09575-2

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© The Author(s) 2019

Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/.

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Fig. 3 — Benchmarking for the synthetic diploid sample of C. elegans. a Precision-recall evaluation for the synthetic diploid C. elegans based on the reference genomes. Underlined numbers indicate F-measures. b Phasing performances and heterozygosity for the entire genome and a highly divergent region of the synthetic diploid C. elegans. Phased 1k-mer pair rate and heterozygosity in the entire genome (above two graphs) and the highly divergent chromosome II end (bottom two graphs) were calculated using 1 Mbp- and 100 kbp-windows, respectively. Alignments (“Arrangements of the other results”) were performed using Minimap2²⁰ (see “Methods” section)