. 2018 Dec 5;13(4):902–920. doi: 10.1038/s41396-018-0318-3

Table 1.

Features of metagenome-assembled genomes (MAGs) assembled from P. pectinatus gill and foot specimens

Year of specimen collected	# reads (M)	MAG ID	Size (Mb)	No. of contigs	G+C (%)	N50 (kb)	Categorized species	CheckM^a completeness (%)	BUSCO^b completeness (%)	Contamination (%)	Strain heterogeneity (%)	MAG quality^c
2017	2.7	N1 + P5	3.0	172	63.9	26.7	Ca. Sedimenticola endophacoides	96.5	95.4	1.8	25.0	High
2017	2.7	N1 + N3 + P5	3.0	172	63.9	26.7	Ca. Sedimenticola endophacoides	96.5	95.4	1.8	25.0	High
2014	114	P1	2.7	368	64.5	10.2	Ca. Sedimenticola endophacoides	92.3	83.8	1.2	28.6	Medium
		P2	3.3	466	52.1	8.9	Kistimonas-like sp.	92.9	83.8	1.5	0	Medium
		P3	1.9	177	50.0	15.1	Spirochaeta-like sp.	86.3	70.4	0.8	0	Medium
	2.7	N3 + P5	2.9	338	64.2	11.8	Ca. Sedimenticola endophacoides	96.3	95.1	1.3	0	High
2013	2.1	P4	2.8	423	64.2	8.9	Ca. Sedimenticola endophacoides	94.4	92.5	1.2	16.7	Medium
	2.6	P5	2.7	336	64.5	11.2	Ca. Sedimenticola endophacoides	95.0	93.6	1.1	0	High
	1.6	P6	1.1	440	64.0	2.5	Ca. Sedimenticola endophacoides	38.6	26.3	1.2	0	Low
	3.0	P7	1.8	609	64.2	3.0	Ca. Sedimenticola endophacoides	61.9	46.2	1.4	16.7	Medium
	1.1	P8	1.4	518	64.1	2.7	Ca. Sedimenticola endophacoides	52.4	35.4	1.0	0	Medium
2011	1.1	P9	0.3	150	63.0	2.0	Ca. Sedimenticola endophacoides	20.9	7.7	0.0	0	Low
	3.0	P10	0.5	210	62.3	2.2	Ca. Sedimenticola endophacoides	16.1	15.9	0.0	100.0	Low
	4.9	P11	1.2	455	62.9	2.7	Ca. Sedimenticola endophacoides	40.1	29.0	0.6	25.0	Low
	1.6	P12	0.4	169	63.0	2.1	Ca. Sedimenticola endophacoides	18.9	6.9	0.0	0	Low
	4.1	P13	1.8	585	63.3	3.3	Ca. Sedimenticola endophacoides	58.1	50.2	1.0	12.5	Medium
	1.2	Foot	5.8	265	37.6	2.1	Unclassified	0	0	0	0	Low

Methods for the assessment of MAG metrics and quality are described in SI

^aParks et al. [115]

^bSimao et al. [116]

^cBowers et al. [117]