Table 3.

The 10 most interacting genomic regions within the 109 significant pairwise interactions

Candidate gene	Chr	Classification	Number of appearances
Mecom	3	Craniofacial	20
Pabpc6	17	Other	19
Sdk2	11	Other	19
Prex2	1	Growth/size/body	14
Kcnmb2	3	Other	13
Reg-Chr5	5	Regulatory	11
Bmp7	2	Craniofacial	9
Trim71	9	Craniofacial	9
Cwc22	2	Other	8
Gng5	9	Craniofacial	8

Each row shows the candidate genes within a 200 Kb window, the position within the genome (Chr chromosome), the most likely classification of the best candidate gene assessed in Mouse Genome Informatics (Blake et al. 2017) and the number of times the genomic region (identified with the candidate gene) appears within a significant pairwise interaction with one of the other 38 regions