Table 4. Viral genome sequences identified by virMine from the Lough Neagh virome (Skvortsov et al., 2016).
Contig | Length | # CDS | BLAST hit | Accession # | % QC | % ID | Isolation source |
---|---|---|---|---|---|---|---|
contig_11 | 46,867 | 71 | Chromobacterium rhizoyzae strain JP2-74 | CP031968.1 | 1 | 80 | Rhizosphere |
contig_12 | 46,702 | 74 | Uncultured marine virus isolate CBSM-242 | FJ640348.1 | 0 | 83 | Chesapeake Bay sediment |
contig_13 | 46,245 | 60 | Bacteriophage 11b | AJ842011.2 | 1 | 68 | Arctic sea ice |
contig_17 | 40,578 | 56 | Methylobacterium brachiatum strain TX0642 | CP033231.1 | 6 | 67 | Automobile air-conditioning evaporator |
contig_18 | 40,568 | 61 | Blastochloris sp. GI | AP018907.1 | 0 | 72 | Soda dam hot springs |
contig_2a | 70,520 | 92 | Uncultured virus YBW_Contig_50752 | KU756933.1 | 1 | 72 | North Sea Surface Water Virome |
contig_5 | 56,143 | 55 | Uncultured virus SERC 372681 | KU595468.1 | 2 | 73 | Rhode River surface water |
contig_6 | 55,961 | 75 | Polynucleobacter asymbioticus strain MWH-RechtKol4 | CP015017.1 | 1 | 71 | freshwater |
contig_7 | 55,939 | 77 | Uncultured virus SERC Contig 695464 | KU971113.1 | 0 | 76 | Rhode River surface water |
Notes.
Contig also predicted as viral by VirSorter (Roux et al., 2015).