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. 2019 Apr 1;35(2):164–171. doi: 10.5423/PPJ.OA.10.2018.0206

Table 1.

Sequences of the primers and molecular beacon used in RT-PCR and real-time NASBA assays for detecting ASSVd in apple trees

Primer and probe Sequence (5′→3′)
RT-PCRa ASSVd-F CCCGGTAAACACCGTGCGGT
ASSVd-R ACCGGGAAACACCTATTGTG
Real-time NASBA ASSVd-P1 AATTCTAATACGACTCACTATAGGGAAAGAGCGTGAGAGAACAGG
ASSVd-P2 GCAGATAGATAAAGAAAACGAGGA
ASSVd-MB [6-FAM]-CGCGATCaaggagctgccagcactaagccgGATCGCG-[DABCYL]
a

The primers for RT-PCR were reported by Lee et al. (2001).

*

Underlined letters indicate the T7 RNA polymerse promoter-binding region. Lowercase letters are the specific binding sequences to ASSVd RNA.