Table 7.
Summary of population genetics indices
| No. fungal genotypes | Na | Ne | I | Ho | He | uHe | Percentage of polymorphic loci | Nº private alleles | F | |
|---|---|---|---|---|---|---|---|---|---|---|
| Plot A (Primary infection) | 7 | 3 | 2 | 0.79 | 0.35 | 0.48 | 0.52 | 83% | 0 | 0.292 |
| Plot A (Secondary infection) | 3 | 3 | 2 | 0.75 | 0.33 | 0.46 | 0.56 | 100% | 0 | 0.264 |
| Plot B (Primary infection) | 5 | 3 | 3 | 0.78 | 0.50 | 0.49 | 0.55 | 100% | 1 | −0.106 |
| Plot B (Secondary infection) | 5 | 3 | 2 | 0.83 | 0.37 | 0.50 | 0.56 | 100% | 0 | 0.288 |
| Plot C (Primary infection) | 18 | 3 | 2 | 0.64 | 0.46 | 0.38 | 0.39 | 100% | 1 | −0.163 |
| Plot C (Secondary infection) | 28 | 3 | 2 | 0.79 | 0.57 | 0.45 | 0.46 | 100% | 2 | −0.269 |
| Plot D (Primary infection) | 23 | 3 | 2 | 0.74 | 0.42 | 0.42 | 0.43 | 83% | 2 | −0.083 |
| Plot D (Secondary infection) | 37 | 3 | 2 | 0.84 | 0.40 | 0.43 | 0.44 | 100% | 3 | 0.143 |
N: Sample number; Na: Nº of different alleles; Ne: Nº of effective alleles = 1/(Sum pi2); I: Shannon Index; Ho: Observed heterozygosis; He: Expected heterozygosis; uHe: Unbiased expected heterozygosity = (2N/(2N−1))*He; F: Fixation index = (He−Ho)/He = 1−(Ho/He).