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. Author manuscript; available in PMC: 2019 Apr 16.
Published in final edited form as: Nat Biotechnol. 2018 Oct 15:10.1038/nbt.4266. doi: 10.1038/nbt.4266

Figure 3. Combined genome draft results of read cloud, SLR, and short read approaches applied to healthy human stool samples.

Figure 3

Under various performance metrics, read clouds (gold) consistently display superior performance in their ability to produce many complete and high-quality genome drafts as compared to either SLRs (blue) or short reads (green) approaches. Performance was also superior even in low short read coverage regimes (defined as <50x coverage). Counts include all complete/high-quality genome bins for all taxa in each approach.

a) Number of complete genome bins (>90% completeness, <5% contamination) with a minimum N50.

b) Number of complete genome bins with a minimum short read coverage depth. Genome bins with lower short read coverage correspond to less abundant organisms.

c) Number of complete genome bins with an N50 of >200kb and a minimum short read coverage depth.

d) Number of high-quality genome bins (complete and with at least 18 tRNAs, as well as at least one instance each of the 5S, 16S, and 23S rRNA genes) with a minimum N50.

e) Number of high-quality genome bins with a minimum short read coverage depth.

f) Number of high-quality genome bins with an N50 of >200kb and a minimum short read coverage depth.