Table 1.
Most highly upregulated transcripts in three ducks infected with HPAI A/duck/Hubei/49/2005 (H5N1) at 1 dpi, relative to mock-infected controls, in descending order. Transcriptome data from the NCBI Sequence Read Archive (control transcriptome accession: SRR797835, infected 1 dpi transcriptome accession: SRR797836) were internally normalized to a housekeeping gene, hydroxymethylbilane synthase (ENSAPLT00000008800), before comparison.
| Gene Name | Ensembl ID |
|---|---|
| RSAD2 (Viperin) | ENSAPLT00000006241 |
| IFIT5 | ENSAPLT00000001602 |
| CCL4 | ENSAPLT00000010196 |
| EIF2AK2 (PKR) | ENSAPLT00000010258 |
| ISG15 | ENSAPLT00000016054 |
| IL4I1 | ENSAPLT00000016724 |
| USP18 | ENSAPLT00000007808 |
| EPSTI1 | ENSAPLT00000005561 |
| CMPK2 | ENSAPLT00000006212 |
| CCL19 | ENSAPLT00000005578 |
| MX | ENSAPLT00000016707 |