Figure 7.

Generalized structure of all high confidence (cmsearch evalue $<{10}^{-5}$) hits of T.xrRNA1, T.xrRNA2 and N.xrRNA. (a) Consensus structure prediction and (b) structural alignment of all high confidence hits. (c–e) Neighbor-joining tree of all high confidence hits of N.xrRNA (c), T.xrRNA1 (d), and T.xrRNA2 (e). Leaves are grouped and colored by the CM used for annotation, coordinates correspond to the position in the respective 3${}^{\prime }$UTR. For each group a separate structural alignment was computed, the consensus structures are shown.