Figure 2.

Differentially expressed genes between virus-infected and virus-free samples. (A) Volcano plot displaying probability on the Y-axis, index of gene differences from NOIseq, and Log2 (fold-change (FC)-value) on the X-axis. The red dots represent up-regulated differentially expressed transcripts between virus-infected and virus-free samples, green dots represent down-regulated transcripts, and gray dots indicate genes not showing statistical significance. (B) Stacked column showing statistics of differential genes, and red represents significantly expression genes. (C) The expression of eight DEGs (four up-regulated and four down-regulated DEGs) were examined via RT-qPCR. Three technical replicates were performed for each RT-qPCR. The ubiquitin gene was used as a reference gene.