Table 1 |.
Protein symbol | IcsB transfection | S. flexneri WT infection | S. flexneri ΔvirA infection | Loss of function test | Lipidation | Classification |
---|---|---|---|---|---|---|
RHOA, RHOC, RHOG, RAC1 | √ | √ | √ | Knockout | * | Rho family |
RHOF | √ | √ | Knockout | * | ||
RAC2 | √ | Not tested | * | |||
CDC42 | √ | √ | Knockout | * | ||
H-RAS, K-RAS, R-RAS, RAP1B | √ | √ | √ | Knockout | * | Ras family |
RALA | √ | √ | √ | Not tested | * | |
RALB | √ | √ | Not tested | * | ||
RAP1A | √ | √ | Knockout | * | ||
RHEB | √ | Not tested | * | |||
RAB8A, RAB11A, RAB11B, RAB13, | √ | √ | √ | Knockout | * | Rab family |
RAB22A, RAB23, RAB34, RAB35 | ||||||
RAB5B | √ | √ | Not tested | * | ||
RAB6A | √ | Knockout | * | |||
RAB6B | √ | Knockout | * | |||
RAB9A | √ | √ | Knockout | * | ||
RAB39A | √ | Not tested | * | |||
YKT6 | √ | √ | √ | RNAi (85%) | * | SNARE |
VAMP3 | √ | RNAi (89%) | ||||
VAMP8 | √ | √ | √ | Knockout | ||
BNIP1 | √ | Not tested | ||||
SEC22B | √ | RNAi (95%) | ||||
SEPT2 | √ | Not tested | Septin | |||
SEPT7 | √ | √ | √ | RNAi (70%) | ||
SEPT9 | √ | Not tested | ||||
SEPT11 | √ | √ | Knockout | |||
CHMP5 | √ | √ | √ | Knockout | ||
CHMP4B | √ | Not tested | ||||
BASP1 | √ | √ | √ | Not tested | * | |
MARCKS | √ | √ | √ | Knockout | * | |
MARCKSL1 | √ | √ | √ | Not tested | * | |
CNP | √ | √ | √ | Knockout | * | |
GNG12 | √ | √ | Not tested | * | ||
CD44 | √ | √ | Knockout | |||
CDCP1 | √ | √ | Not tested | |||
DSG2 | √ | √ | Knockout | |||
FNBP1L | √ | √ | Knockout | |||
WASL | √ | √ | Not tested | |||
TRIP10 | √ | √ | Knockout | |||
FERMT2 | √ | Not tested | ||||
EPS8 | √ | Not tested | ||||
EPS8L2 | √ | Not tested | ||||
S100A13 | √ | Not tested | ||||
PTRF | √ | Not tested | ||||
GIPC1 | √ | Not tested | ||||
FKBP8 | √ | RNAi (95%) | ||||
FKBP11 | √ | Not tested | ||||
EPB41L2 | √ | Not tested | ||||
EPB41L1 | √ | Not tested |
RNAi, RNA interference.